Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITCHQ96J02 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ITCHQ96J02 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ITCHQ96J02 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ITCHQ96J02 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ITCHQ96J02 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ITCHQ96J02 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITCHQ96J02 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITCHQ96J02 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.02■□□□□ 0.8
ITCHQ96J02 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITCHQ96J02 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ITCHQ96J02 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ITCHQ96J02 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.02■□□□□ 0.8
ITCHQ96J02 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ITCHQ96J02 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.02■□□□□ 0.8
ITCHQ96J02 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITCHQ96J02 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.02■□□□□ 0.8
ITCHQ96J02 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.02■□□□□ 0.8
ITCHQ96J02 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
ITCHQ96J02 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ITCHQ96J02 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
ITCHQ96J02 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ITCHQ96J02 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITCHQ96J02 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITCHQ96J02 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ITCHQ96J02 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITCHQ96J02 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.01■□□□□ 0.79
ITCHQ96J02 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.01■□□□□ 0.79
ITCHQ96J02 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ITCHQ96J02 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.01■□□□□ 0.79
ITCHQ96J02 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.01■□□□□ 0.79
ITCHQ96J02 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ITCHQ96J02 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITCHQ96J02 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ITCHQ96J02 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITCHQ96J02 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITCHQ96J02 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ITCHQ96J02 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ITCHQ96J02 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ITCHQ96J02 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITCHQ96J02 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITCHQ96J02 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20■□□□□ 0.79
ITCHQ96J02 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ITCHQ96J02 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20■□□□□ 0.79
ITCHQ96J02 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20■□□□□ 0.79
ITCHQ96J02 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20■□□□□ 0.79
ITCHQ96J02 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ITCHQ96J02 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITCHQ96J02 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
ITCHQ96J02 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITCHQ96J02 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITCHQ96J02 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITCHQ96J02 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.99■□□□□ 0.79
ITCHQ96J02 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
ITCHQ96J02 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ITCHQ96J02 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
ITCHQ96J02 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITCHQ96J02 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITCHQ96J02 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.99■□□□□ 0.79
ITCHQ96J02 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITCHQ96J02 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITCHQ96J02 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ITCHQ96J02 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITCHQ96J02 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.99■□□□□ 0.79
ITCHQ96J02 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITCHQ96J02 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITCHQ96J02 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ITCHQ96J02 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ITCHQ96J02 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITCHQ96J02 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITCHQ96J02 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITCHQ96J02 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITCHQ96J02 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ITCHQ96J02 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITCHQ96J02 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.98■□□□□ 0.79
ITCHQ96J02 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.98■□□□□ 0.79
ITCHQ96J02 AC131281.2-201ENST00000520478 145 ntBASIC19.98■□□□□ 0.79
ITCHQ96J02 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.98■□□□□ 0.79
ITCHQ96J02 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.98■□□□□ 0.79
ITCHQ96J02 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.98■□□□□ 0.79
ITCHQ96J02 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ITCHQ96J02 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ITCHQ96J02 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.97■□□□□ 0.79
ITCHQ96J02 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITCHQ96J02 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms