Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.28■■□□□ 1
LRRC39Q96DD0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC39Q96DD0 AL157384.1-201ENST00000445995 2473 ntBASIC21.28■■□□□ 1
LRRC39Q96DD0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC39Q96DD0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.28■■□□□ 1
LRRC39Q96DD0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.28■■□□□ 1
LRRC39Q96DD0 AC126544.1-201ENST00000580842 1059 ntBASIC21.28■■□□□ 1
LRRC39Q96DD0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC39Q96DD0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC39Q96DD0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC39Q96DD0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.28■■□□□ 1
LRRC39Q96DD0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.28■■□□□ 1
LRRC39Q96DD0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.28■■□□□ 1
LRRC39Q96DD0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRRC39Q96DD0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.28■■□□□ 1
LRRC39Q96DD0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LRRC39Q96DD0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC39Q96DD0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.27■■□□□ 1
LRRC39Q96DD0 AC055733.4-201ENST00000638462 1354 ntBASIC21.27■■□□□ 1
LRRC39Q96DD0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC39Q96DD0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC39Q96DD0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC39Q96DD0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRRC39Q96DD0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRRC39Q96DD0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.27■■□□□ 1
LRRC39Q96DD0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC39Q96DD0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LRRC39Q96DD0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC39Q96DD0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LRRC39Q96DD0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 AC024257.2-201ENST00000549699 147 ntBASIC21.26■□□□□ 0.99
LRRC39Q96DD0 AL136162.1-201ENST00000607711 1078 ntBASIC21.26■□□□□ 0.99
LRRC39Q96DD0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 AC073130.3-201ENST00000624389 2278 ntBASIC21.26■□□□□ 0.99
LRRC39Q96DD0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC39Q96DD0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 FEM1AP1-201ENST00000431297 1995 ntBASIC21.25■□□□□ 0.99
LRRC39Q96DD0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 AC135279.3-201ENST00000610945 1311 ntBASIC21.25■□□□□ 0.99
LRRC39Q96DD0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC39Q96DD0 AC006128.1-201ENST00000624704 1661 ntBASIC21.24■□□□□ 0.99
LRRC39Q96DD0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LRRC39Q96DD0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC39Q96DD0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms