Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM54Q969K7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM54Q969K7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM54Q969K7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM54Q969K7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM54Q969K7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM54Q969K7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM54Q969K7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TMEM54Q969K7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM54Q969K7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.61■□□□□ 0.57
TMEM54Q969K7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM54Q969K7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM54Q969K7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM54Q969K7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM54Q969K7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM54Q969K7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM54Q969K7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM54Q969K7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM54Q969K7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM54Q969K7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.6■□□□□ 0.57
TMEM54Q969K7 AC097381.1-201ENST00000429019 1296 ntBASIC18.6■□□□□ 0.57
TMEM54Q969K7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM54Q969K7 AC138907.5-202ENST00000569484 235 ntBASIC18.6■□□□□ 0.57
TMEM54Q969K7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM54Q969K7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM54Q969K7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM54Q969K7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TMEM54Q969K7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM54Q969K7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM54Q969K7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM54Q969K7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM54Q969K7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM54Q969K7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TMEM54Q969K7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM54Q969K7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM54Q969K7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM54Q969K7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM54Q969K7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM54Q969K7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.59■□□□□ 0.57
TMEM54Q969K7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.59■□□□□ 0.57
TMEM54Q969K7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.59■□□□□ 0.57
TMEM54Q969K7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.59■□□□□ 0.57
TMEM54Q969K7 MIR6821-201ENST00000617625 74 ntBASIC18.59■□□□□ 0.57
TMEM54Q969K7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM54Q969K7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM54Q969K7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM54Q969K7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM54Q969K7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM54Q969K7 AL024507.2-201ENST00000606070 2574 ntBASIC18.59■□□□□ 0.57
TMEM54Q969K7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM54Q969K7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM54Q969K7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
TMEM54Q969K7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TMEM54Q969K7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.58■□□□□ 0.57
TMEM54Q969K7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TMEM54Q969K7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TMEM54Q969K7 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEM54Q969K7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.58■□□□□ 0.56
TMEM54Q969K7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.58■□□□□ 0.56
TMEM54Q969K7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.58■□□□□ 0.56
TMEM54Q969K7 DUX4L2-201ENST00000561772 1275 ntBASIC18.58■□□□□ 0.56
TMEM54Q969K7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.58■□□□□ 0.56
TMEM54Q969K7 AC104187.1-201ENST00000607510 612 ntBASIC18.58■□□□□ 0.56
TMEM54Q969K7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
TMEM54Q969K7 DUX4L6-201ENST00000626483 1275 ntBASIC18.58■□□□□ 0.56
TMEM54Q969K7 DUX4L1-201ENST00000627662 1275 ntBASIC18.58■□□□□ 0.56
TMEM54Q969K7 DUX4L8-201ENST00000629013 1275 ntBASIC18.58■□□□□ 0.56
TMEM54Q969K7 DUX4L3-201ENST00000630187 1275 ntBASIC18.58■□□□□ 0.56
TMEM54Q969K7 DUX4L7-201ENST00000630678 1275 ntBASIC18.58■□□□□ 0.56
TMEM54Q969K7 DUX4L5-201ENST00000630834 1275 ntBASIC18.58■□□□□ 0.56
TMEM54Q969K7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TMEM54Q969K7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM54Q969K7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM54Q969K7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMEM54Q969K7 AP004607.4-201ENST00000530158 1459 ntBASIC18.58■□□□□ 0.56
TMEM54Q969K7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEM54Q969K7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEM54Q969K7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TMEM54Q969K7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM54Q969K7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM54Q969K7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM54Q969K7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEM54Q969K7 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.57■□□□□ 0.56
TMEM54Q969K7 AC008175.2-201ENST00000612840 297 ntBASIC18.57■□□□□ 0.56
TMEM54Q969K7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEM54Q969K7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM54Q969K7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEM54Q969K7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
TMEM54Q969K7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TMEM54Q969K7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TMEM54Q969K7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TMEM54Q969K7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
TMEM54Q969K7 AC004854.2-201ENST00000608450 1441 ntBASIC18.57■□□□□ 0.56
TMEM54Q969K7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM54Q969K7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.56■□□□□ 0.56
TMEM54Q969K7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.56■□□□□ 0.56
TMEM54Q969K7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TMEM54Q969K7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM54Q969K7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM54Q969K7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms