Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RTF1Q92541 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
RTF1Q92541 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RTF1Q92541 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
RTF1Q92541 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
RTF1Q92541 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC27.58■■■□□ 2.01
RTF1Q92541 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RTF1Q92541 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
RTF1Q92541 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
RTF1Q92541 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC27.58■■■□□ 2.01
RTF1Q92541 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC27.58■■■□□ 2.01
RTF1Q92541 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC27.58■■■□□ 2.01
RTF1Q92541 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC27.58■■■□□ 2.01
RTF1Q92541 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC27.57■■■□□ 2
RTF1Q92541 AL355802.2-201ENST00000402069 882 ntBASIC27.57■■■□□ 2
RTF1Q92541 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC27.57■■■□□ 2
RTF1Q92541 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC27.57■■■□□ 2
RTF1Q92541 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RTF1Q92541 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
RTF1Q92541 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC27.57■■■□□ 2
RTF1Q92541 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RTF1Q92541 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC27.57■■■□□ 2
RTF1Q92541 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RTF1Q92541 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
RTF1Q92541 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC27.56■■■□□ 2
RTF1Q92541 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC27.56■■■□□ 2
RTF1Q92541 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.56■■■□□ 2
RTF1Q92541 AC007322.4-201ENST00000509611 723 ntBASIC27.56■■■□□ 2
RTF1Q92541 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC27.56■■■□□ 2
RTF1Q92541 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC27.56■■■□□ 2
RTF1Q92541 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RTF1Q92541 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RTF1Q92541 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RTF1Q92541 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC27.56■■■□□ 2
RTF1Q92541 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RTF1Q92541 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC27.56■■■□□ 2
RTF1Q92541 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RTF1Q92541 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RTF1Q92541 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
RTF1Q92541 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC27.55■■■□□ 2
RTF1Q92541 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC27.55■■■□□ 2
RTF1Q92541 METTL15-202ENST00000403099 795 ntTSL 5 BASIC27.55■■■□□ 2
RTF1Q92541 DENND3-207ENST00000518347 850 ntTSL 2 BASIC27.55■■■□□ 2
RTF1Q92541 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC27.55■■■□□ 2
RTF1Q92541 OAS3-207ENST00000551007 998 ntTSL 2 BASIC27.55■■■□□ 2
RTF1Q92541 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.55■■■□□ 2
RTF1Q92541 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
RTF1Q92541 AC068338.2-201ENST00000563278 1430 ntBASIC27.55■■■□□ 2
RTF1Q92541 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RTF1Q92541 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC27.55■■■□□ 2
RTF1Q92541 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC27.55■■■□□ 2
RTF1Q92541 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
RTF1Q92541 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
RTF1Q92541 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC27.54■■■□□ 2
RTF1Q92541 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC27.54■■■□□ 2
RTF1Q92541 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
RTF1Q92541 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RTF1Q92541 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RTF1Q92541 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
RTF1Q92541 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC27.53■■■□□ 2
RTF1Q92541 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
RTF1Q92541 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC27.53■■■□□ 2
RTF1Q92541 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC27.53■■■□□ 2
RTF1Q92541 TSPY6P-201ENST00000448518 926 ntBASIC27.53■■■□□ 2
RTF1Q92541 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC27.53■■■□□ 2
RTF1Q92541 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC27.52■■■□□ 2
RTF1Q92541 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
RTF1Q92541 RBM17P2-201ENST00000616397 1405 ntBASIC27.52■■■□□ 2
RTF1Q92541 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
RTF1Q92541 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RTF1Q92541 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RTF1Q92541 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RTF1Q92541 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
RTF1Q92541 AF201337.1-201ENST00000520239 748 ntBASIC27.52■■■□□ 2
RTF1Q92541 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.52■■■□□ 2
RTF1Q92541 AC133552.2-202ENST00000575694 574 ntBASIC27.52■■■□□ 2
RTF1Q92541 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RTF1Q92541 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC27.52■■■□□ 2
RTF1Q92541 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.52■■■□□ 2
RTF1Q92541 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
RTF1Q92541 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
RTF1Q92541 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
RTF1Q92541 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RTF1Q92541 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RTF1Q92541 BET1L-204ENST00000410108 637 ntTSL 3 BASIC27.51■■□□□ 1.99
RTF1Q92541 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC27.51■■□□□ 1.99
RTF1Q92541 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
RTF1Q92541 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RTF1Q92541 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RTF1Q92541 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RTF1Q92541 CYP2T1P-201ENST00000432607 1285 ntBASIC27.5■■□□□ 1.99
RTF1Q92541 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC27.5■■□□□ 1.99
RTF1Q92541 AC105036.2-201ENST00000569468 176 ntBASIC27.5■■□□□ 1.99
RTF1Q92541 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
RTF1Q92541 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RTF1Q92541 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RTF1Q92541 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RTF1Q92541 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RTF1Q92541 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RTF1Q92541 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms