Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.55■□□□□ 0.24
MBD3L1Q8WWY6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MBD3L1Q8WWY6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
MBD3L1Q8WWY6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.53■□□□□ 0.24
MBD3L1Q8WWY6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MBD3L1Q8WWY6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MBD3L1Q8WWY6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
MBD3L1Q8WWY6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MBD3L1Q8WWY6 AL162377.1-201ENST00000618844 1793 ntBASIC16.52■□□□□ 0.24
MBD3L1Q8WWY6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.52■□□□□ 0.24
MBD3L1Q8WWY6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
MBD3L1Q8WWY6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MBD3L1Q8WWY6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MBD3L1Q8WWY6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.52■□□□□ 0.24
MBD3L1Q8WWY6 AL031602.1-201ENST00000633169 911 ntBASIC16.52■□□□□ 0.24
MBD3L1Q8WWY6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
MBD3L1Q8WWY6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.52■□□□□ 0.24
MBD3L1Q8WWY6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.52■□□□□ 0.24
MBD3L1Q8WWY6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.52■□□□□ 0.23
MBD3L1Q8WWY6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
MBD3L1Q8WWY6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MBD3L1Q8WWY6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.52■□□□□ 0.23
MBD3L1Q8WWY6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MBD3L1Q8WWY6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MBD3L1Q8WWY6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.52■□□□□ 0.23
MBD3L1Q8WWY6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 MIR7108-201ENST00000614319 87 ntBASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
MBD3L1Q8WWY6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 AC129492.7-201ENST00000622992 756 ntBASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L1Q8WWY6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 RNF126P1-201ENST00000567452 1320 ntBASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L1Q8WWY6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms