Protein–RNA interactions for Protein: Q8WVK7

SKA2, Spindle and kinetochore-associated protein 2, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2Q8WVK7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SKA2Q8WVK7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.85■□□□□ 0.93
SKA2Q8WVK7 LINC02228-203ENST00000641970 1355 ntBASIC20.85■□□□□ 0.93
SKA2Q8WVK7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.84■□□□□ 0.93
SKA2Q8WVK7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SKA2Q8WVK7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SKA2Q8WVK7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SKA2Q8WVK7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SKA2Q8WVK7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SKA2Q8WVK7 TPRG1LP1-201ENST00000598702 760 ntBASIC20.84■□□□□ 0.93
SKA2Q8WVK7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SKA2Q8WVK7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SKA2Q8WVK7 AC055733.4-201ENST00000638462 1354 ntBASIC20.84■□□□□ 0.93
SKA2Q8WVK7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.84■□□□□ 0.93
SKA2Q8WVK7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKA2Q8WVK7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKA2Q8WVK7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.83■□□□□ 0.93
SKA2Q8WVK7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKA2Q8WVK7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SKA2Q8WVK7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.83■□□□□ 0.93
SKA2Q8WVK7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKA2Q8WVK7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKA2Q8WVK7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.83■□□□□ 0.93
SKA2Q8WVK7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
SKA2Q8WVK7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.83■□□□□ 0.93
SKA2Q8WVK7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SKA2Q8WVK7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SKA2Q8WVK7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
SKA2Q8WVK7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.83■□□□□ 0.92
SKA2Q8WVK7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 AC244015.2-201ENST00000616358 1861 ntBASIC20.82■□□□□ 0.92
SKA2Q8WVK7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 YBX1P1-201ENST00000445822 960 ntBASIC20.82■□□□□ 0.92
SKA2Q8WVK7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SKA2Q8WVK7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 AC079140.4-201ENST00000507448 529 ntBASIC20.81■□□□□ 0.92
SKA2Q8WVK7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SKA2Q8WVK7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SKA2Q8WVK7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SKA2Q8WVK7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SKA2Q8WVK7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
SKA2Q8WVK7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SKA2Q8WVK7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SKA2Q8WVK7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SKA2Q8WVK7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SKA2Q8WVK7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.8■□□□□ 0.92
SKA2Q8WVK7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SKA2Q8WVK7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
SKA2Q8WVK7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SKA2Q8WVK7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SKA2Q8WVK7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SKA2Q8WVK7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SKA2Q8WVK7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SKA2Q8WVK7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SKA2Q8WVK7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
SKA2Q8WVK7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SKA2Q8WVK7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.79■□□□□ 0.92
SKA2Q8WVK7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SKA2Q8WVK7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SKA2Q8WVK7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SKA2Q8WVK7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.79■□□□□ 0.92
SKA2Q8WVK7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SKA2Q8WVK7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.79■□□□□ 0.92
SKA2Q8WVK7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SKA2Q8WVK7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms