Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SH3RF3Q8TEJ3 AC098934.4-201ENST00000564127 592 ntBASIC25.17■■□□□ 1.62
SH3RF3Q8TEJ3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.17■■□□□ 1.62
SH3RF3Q8TEJ3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.17■■□□□ 1.62
SH3RF3Q8TEJ3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC25.17■■□□□ 1.62
SH3RF3Q8TEJ3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SH3RF3Q8TEJ3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.17■■□□□ 1.62
SH3RF3Q8TEJ3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SH3RF3Q8TEJ3 AC093787.1-201ENST00000450396 207 ntBASIC25.16■■□□□ 1.62
SH3RF3Q8TEJ3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.16■■□□□ 1.62
SH3RF3Q8TEJ3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.16■■□□□ 1.62
SH3RF3Q8TEJ3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25.16■■□□□ 1.62
SH3RF3Q8TEJ3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SH3RF3Q8TEJ3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SH3RF3Q8TEJ3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
SH3RF3Q8TEJ3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.16■■□□□ 1.62
SH3RF3Q8TEJ3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SH3RF3Q8TEJ3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
SH3RF3Q8TEJ3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SH3RF3Q8TEJ3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SH3RF3Q8TEJ3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SH3RF3Q8TEJ3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC25.15■■□□□ 1.62
SH3RF3Q8TEJ3 AC016405.3-201ENST00000607710 860 ntBASIC25.15■■□□□ 1.62
SH3RF3Q8TEJ3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
SH3RF3Q8TEJ3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.15■■□□□ 1.62
SH3RF3Q8TEJ3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SH3RF3Q8TEJ3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SH3RF3Q8TEJ3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
SH3RF3Q8TEJ3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.15■■□□□ 1.62
SH3RF3Q8TEJ3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
SH3RF3Q8TEJ3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
SH3RF3Q8TEJ3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.14■■□□□ 1.62
SH3RF3Q8TEJ3 AC068473.5-201ENST00000616428 2072 ntBASIC25.14■■□□□ 1.62
SH3RF3Q8TEJ3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SH3RF3Q8TEJ3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
SH3RF3Q8TEJ3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SH3RF3Q8TEJ3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SH3RF3Q8TEJ3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC25.14■■□□□ 1.62
SH3RF3Q8TEJ3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.14■■□□□ 1.62
SH3RF3Q8TEJ3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.62
SH3RF3Q8TEJ3 AC233723.2-201ENST00000623798 2106 ntBASIC25.14■■□□□ 1.62
SH3RF3Q8TEJ3 MARS-234ENST00000630571 216 ntTSL 5 BASIC25.14■■□□□ 1.62
SH3RF3Q8TEJ3 MARS-235ENST00000630803 183 ntTSL 3 BASIC25.14■■□□□ 1.62
SH3RF3Q8TEJ3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SH3RF3Q8TEJ3 C11orf96-202ENST00000528572 1834 ntBASIC25.14■■□□□ 1.61
SH3RF3Q8TEJ3 AC242852.2-201ENST00000615738 1807 ntBASIC25.14■■□□□ 1.61
SH3RF3Q8TEJ3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 GUSBP5-202ENST00000510805 1989 ntBASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SH3RF3Q8TEJ3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SH3RF3Q8TEJ3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SH3RF3Q8TEJ3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SH3RF3Q8TEJ3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.12■■□□□ 1.61
SH3RF3Q8TEJ3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SH3RF3Q8TEJ3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.12■■□□□ 1.61
SH3RF3Q8TEJ3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.12■■□□□ 1.61
SH3RF3Q8TEJ3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC25.12■■□□□ 1.61
SH3RF3Q8TEJ3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SH3RF3Q8TEJ3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC25.12■■□□□ 1.61
SH3RF3Q8TEJ3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.12■■□□□ 1.61
SH3RF3Q8TEJ3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SH3RF3Q8TEJ3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SH3RF3Q8TEJ3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SH3RF3Q8TEJ3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.11■■□□□ 1.61
SH3RF3Q8TEJ3 AC243732.1-201ENST00000612648 864 ntBASIC25.11■■□□□ 1.61
SH3RF3Q8TEJ3 OR10C1-204ENST00000622521 1039 ntBASIC25.11■■□□□ 1.61
SH3RF3Q8TEJ3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
SH3RF3Q8TEJ3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SH3RF3Q8TEJ3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC25.11■■□□□ 1.61
SH3RF3Q8TEJ3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SH3RF3Q8TEJ3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
SH3RF3Q8TEJ3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.1■■□□□ 1.61
SH3RF3Q8TEJ3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SH3RF3Q8TEJ3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SH3RF3Q8TEJ3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SH3RF3Q8TEJ3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
SH3RF3Q8TEJ3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
SH3RF3Q8TEJ3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SH3RF3Q8TEJ3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
SH3RF3Q8TEJ3 AC069152.1-201ENST00000438030 544 ntBASIC25.1■■□□□ 1.61
SH3RF3Q8TEJ3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.1■■□□□ 1.61
SH3RF3Q8TEJ3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.1■■□□□ 1.61
SH3RF3Q8TEJ3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC25.1■■□□□ 1.61
SH3RF3Q8TEJ3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.1■■□□□ 1.61
SH3RF3Q8TEJ3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms