Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCER1Q8TC90 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
CCER1Q8TC90 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC31.39■■■□□ 2.61
CCER1Q8TC90 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC31.38■■■□□ 2.61
CCER1Q8TC90 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CCER1Q8TC90 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC31.38■■■□□ 2.61
CCER1Q8TC90 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCER1Q8TC90 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC31.38■■■□□ 2.61
CCER1Q8TC90 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.38■■■□□ 2.61
CCER1Q8TC90 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC31.38■■■□□ 2.61
CCER1Q8TC90 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCER1Q8TC90 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCER1Q8TC90 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC31.38■■■□□ 2.61
CCER1Q8TC90 PXK-203ENST00000383715 1756 ntTSL 5 BASIC31.38■■■□□ 2.61
CCER1Q8TC90 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CCER1Q8TC90 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CCER1Q8TC90 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC31.38■■■□□ 2.61
CCER1Q8TC90 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.37■■■□□ 2.61
CCER1Q8TC90 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCER1Q8TC90 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC31.37■■■□□ 2.61
CCER1Q8TC90 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC31.37■■■□□ 2.61
CCER1Q8TC90 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
CCER1Q8TC90 MIR4767-201ENST00000582827 78 ntBASIC31.37■■■□□ 2.61
CCER1Q8TC90 ASL-203ENST00000380839 1765 ntTSL 5 BASIC31.37■■■□□ 2.61
CCER1Q8TC90 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CCER1Q8TC90 LINC01521-201ENST00000504184 1943 ntBASIC31.37■■■□□ 2.61
CCER1Q8TC90 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC31.37■■■□□ 2.61
CCER1Q8TC90 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC31.37■■■□□ 2.61
CCER1Q8TC90 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCER1Q8TC90 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CCER1Q8TC90 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC31.36■■■□□ 2.61
CCER1Q8TC90 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCER1Q8TC90 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCER1Q8TC90 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCER1Q8TC90 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC31.36■■■□□ 2.61
CCER1Q8TC90 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC31.36■■■□□ 2.61
CCER1Q8TC90 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.36■■■□□ 2.61
CCER1Q8TC90 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CCER1Q8TC90 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCER1Q8TC90 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCER1Q8TC90 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
CCER1Q8TC90 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCER1Q8TC90 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCER1Q8TC90 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCER1Q8TC90 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCER1Q8TC90 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCER1Q8TC90 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCER1Q8TC90 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
CCER1Q8TC90 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCER1Q8TC90 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCER1Q8TC90 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCER1Q8TC90 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCER1Q8TC90 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCER1Q8TC90 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCER1Q8TC90 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCER1Q8TC90 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC31.34■■■□□ 2.61
CCER1Q8TC90 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCER1Q8TC90 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC31.34■■■□□ 2.61
CCER1Q8TC90 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC31.34■■■□□ 2.61
CCER1Q8TC90 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.34■■■□□ 2.61
CCER1Q8TC90 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.34■■■□□ 2.61
CCER1Q8TC90 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCER1Q8TC90 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCER1Q8TC90 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCER1Q8TC90 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCER1Q8TC90 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
CCER1Q8TC90 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CCER1Q8TC90 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC31.33■■■□□ 2.61
CCER1Q8TC90 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC31.33■■■□□ 2.61
CCER1Q8TC90 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCER1Q8TC90 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCER1Q8TC90 UNC93B3-201ENST00000308076 687 ntBASIC31.33■■■□□ 2.61
CCER1Q8TC90 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CCER1Q8TC90 BX842568.3-201ENST00000418104 571 ntBASIC31.33■■■□□ 2.61
CCER1Q8TC90 AC133561.4-201ENST00000566112 224 ntBASIC31.33■■■□□ 2.61
CCER1Q8TC90 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
CCER1Q8TC90 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC31.33■■■□□ 2.61
CCER1Q8TC90 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC31.32■■■□□ 2.6
CCER1Q8TC90 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCER1Q8TC90 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC31.32■■■□□ 2.6
CCER1Q8TC90 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCER1Q8TC90 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
CCER1Q8TC90 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCER1Q8TC90 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC31.32■■■□□ 2.6
CCER1Q8TC90 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCER1Q8TC90 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CCER1Q8TC90 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCER1Q8TC90 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC31.32■■■□□ 2.6
CCER1Q8TC90 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC31.31■■■□□ 2.6
CCER1Q8TC90 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CCER1Q8TC90 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCER1Q8TC90 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCER1Q8TC90 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCER1Q8TC90 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CCER1Q8TC90 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCER1Q8TC90 NARF-205ENST00000412079 1760 ntTSL 5 BASIC31.31■■■□□ 2.6
CCER1Q8TC90 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC31.31■■■□□ 2.6
CCER1Q8TC90 FEM1AP1-201ENST00000431297 1995 ntBASIC31.31■■■□□ 2.6
CCER1Q8TC90 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCER1Q8TC90 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms