Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HMCN2Q8NDA2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HMCN2Q8NDA2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
HMCN2Q8NDA2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC12.02□□□□□ -0.48
HMCN2Q8NDA2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
HMCN2Q8NDA2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
HMCN2Q8NDA2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HMCN2Q8NDA2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HMCN2Q8NDA2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
HMCN2Q8NDA2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
HMCN2Q8NDA2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
HMCN2Q8NDA2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
HMCN2Q8NDA2 AC087633.2-202ENST00000565166 1439 ntBASIC12.02□□□□□ -0.49
HMCN2Q8NDA2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.02□□□□□ -0.49
HMCN2Q8NDA2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC12.02□□□□□ -0.49
HMCN2Q8NDA2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
HMCN2Q8NDA2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.02□□□□□ -0.49
HMCN2Q8NDA2 CYP2D8P-201ENST00000433633 1490 ntBASIC12.02□□□□□ -0.49
HMCN2Q8NDA2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC12.02□□□□□ -0.49
HMCN2Q8NDA2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC12.02□□□□□ -0.49
HMCN2Q8NDA2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
HMCN2Q8NDA2 AC006538.3-201ENST00000612495 578 ntBASIC12.02□□□□□ -0.49
HMCN2Q8NDA2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
HMCN2Q8NDA2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HMCN2Q8NDA2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
HMCN2Q8NDA2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 AC135731.1-201ENST00000569415 2548 ntBASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
HMCN2Q8NDA2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HMCN2Q8NDA2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
HMCN2Q8NDA2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12□□□□□ -0.49
HMCN2Q8NDA2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
HMCN2Q8NDA2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
HMCN2Q8NDA2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HMCN2Q8NDA2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HMCN2Q8NDA2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HMCN2Q8NDA2 SLC25A3P1-201ENST00000443844 931 ntBASIC12□□□□□ -0.49
HMCN2Q8NDA2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HMCN2Q8NDA2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 AP000525.1-201ENST00000608286 694 ntBASIC12□□□□□ -0.49
HMCN2Q8NDA2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC12□□□□□ -0.49
HMCN2Q8NDA2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
HMCN2Q8NDA2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12□□□□□ -0.49
HMCN2Q8NDA2 PVRIG2P-201ENST00000435460 978 ntBASIC12□□□□□ -0.49
HMCN2Q8NDA2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HMCN2Q8NDA2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC12□□□□□ -0.49
HMCN2Q8NDA2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC11.99□□□□□ -0.49
HMCN2Q8NDA2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms