Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMRP1Q8NCR6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SMRP1Q8NCR6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMRP1Q8NCR6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMRP1Q8NCR6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.01■■□□□ 1.11
SMRP1Q8NCR6 KRT17P3-201ENST00000420566 1262 ntBASIC22.01■■□□□ 1.11
SMRP1Q8NCR6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SMRP1Q8NCR6 LINC01023-201ENST00000606054 436 ntBASIC22.01■■□□□ 1.11
SMRP1Q8NCR6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMRP1Q8NCR6 AC100791.3-201ENST00000617619 330 ntBASIC22.01■■□□□ 1.11
SMRP1Q8NCR6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMRP1Q8NCR6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMRP1Q8NCR6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.01■■□□□ 1.11
SMRP1Q8NCR6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
SMRP1Q8NCR6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SMRP1Q8NCR6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22■■□□□ 1.11
SMRP1Q8NCR6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22■■□□□ 1.11
SMRP1Q8NCR6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22■■□□□ 1.11
SMRP1Q8NCR6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22■■□□□ 1.11
SMRP1Q8NCR6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22■■□□□ 1.11
SMRP1Q8NCR6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22■■□□□ 1.11
SMRP1Q8NCR6 PNMA6B-201ENST00000538162 1200 ntBASIC22■■□□□ 1.11
SMRP1Q8NCR6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22■■□□□ 1.11
SMRP1Q8NCR6 FAM21FP-204ENST00000608637 956 ntBASIC22■■□□□ 1.11
SMRP1Q8NCR6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMRP1Q8NCR6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SMRP1Q8NCR6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SMRP1Q8NCR6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22■■□□□ 1.11
SMRP1Q8NCR6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22■■□□□ 1.11
SMRP1Q8NCR6 AC061975.6-201ENST00000579045 1553 ntBASIC21.99■■□□□ 1.11
SMRP1Q8NCR6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.99■■□□□ 1.11
SMRP1Q8NCR6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMRP1Q8NCR6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMRP1Q8NCR6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SMRP1Q8NCR6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.99■■□□□ 1.11
SMRP1Q8NCR6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.99■■□□□ 1.11
SMRP1Q8NCR6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMRP1Q8NCR6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.99■■□□□ 1.11
SMRP1Q8NCR6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.99■■□□□ 1.11
SMRP1Q8NCR6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SMRP1Q8NCR6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMRP1Q8NCR6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMRP1Q8NCR6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMRP1Q8NCR6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMRP1Q8NCR6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMRP1Q8NCR6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.98■■□□□ 1.11
SMRP1Q8NCR6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.98■■□□□ 1.11
SMRP1Q8NCR6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMRP1Q8NCR6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMRP1Q8NCR6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMRP1Q8NCR6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SMRP1Q8NCR6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMRP1Q8NCR6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMRP1Q8NCR6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMRP1Q8NCR6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
SMRP1Q8NCR6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMRP1Q8NCR6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMRP1Q8NCR6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.97■■□□□ 1.11
SMRP1Q8NCR6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMRP1Q8NCR6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SMRP1Q8NCR6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMRP1Q8NCR6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SMRP1Q8NCR6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMRP1Q8NCR6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMRP1Q8NCR6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMRP1Q8NCR6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMRP1Q8NCR6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMRP1Q8NCR6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMRP1Q8NCR6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMRP1Q8NCR6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.96■■□□□ 1.11
SMRP1Q8NCR6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.96■■□□□ 1.11
SMRP1Q8NCR6 AC233263.1-201ENST00000578059 224 ntBASIC21.96■■□□□ 1.11
SMRP1Q8NCR6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMRP1Q8NCR6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMRP1Q8NCR6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMRP1Q8NCR6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.95■■□□□ 1.1
SMRP1Q8NCR6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMRP1Q8NCR6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMRP1Q8NCR6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.95■■□□□ 1.1
SMRP1Q8NCR6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.95■■□□□ 1.1
SMRP1Q8NCR6 AL589743.5-201ENST00000616611 1050 ntBASIC21.95■■□□□ 1.1
SMRP1Q8NCR6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SMRP1Q8NCR6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMRP1Q8NCR6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.95■■□□□ 1.1
SMRP1Q8NCR6 AC092368.3-202ENST00000574180 1591 ntBASIC21.95■■□□□ 1.1
SMRP1Q8NCR6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 AC069544.1-201ENST00000609399 999 ntBASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.94■■□□□ 1.1
SMRP1Q8NCR6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms