Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A9Q8NBW4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A9Q8NBW4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A9Q8NBW4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A9Q8NBW4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A9Q8NBW4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC38A9Q8NBW4 CYP2T1P-201ENST00000432607 1285 ntBASIC19.94■□□□□ 0.78
SLC38A9Q8NBW4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A9Q8NBW4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC38A9Q8NBW4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SLC38A9Q8NBW4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.94■□□□□ 0.78
SLC38A9Q8NBW4 KRT16P2-201ENST00000414673 1423 ntBASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 SLC29A4P1-201ENST00000398760 971 ntBASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 FAM99A-202ENST00000538190 1989 ntBASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 RBM17P2-201ENST00000616397 1405 ntBASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC38A9Q8NBW4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC38A9Q8NBW4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A9Q8NBW4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A9Q8NBW4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A9Q8NBW4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SLC38A9Q8NBW4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC38A9Q8NBW4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC38A9Q8NBW4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC38A9Q8NBW4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SLC38A9Q8NBW4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.92■□□□□ 0.78
SLC38A9Q8NBW4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC38A9Q8NBW4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 AC098934.4-201ENST00000564127 592 ntBASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC38A9Q8NBW4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC38A9Q8NBW4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 AC093787.1-201ENST00000450396 207 ntBASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SLC38A9Q8NBW4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms