Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC39CQ8N584 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.48■■□□□ 1.19
TTC39CQ8N584 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.48■■□□□ 1.19
TTC39CQ8N584 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC39CQ8N584 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC39CQ8N584 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TTC39CQ8N584 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC39CQ8N584 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
TTC39CQ8N584 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC39CQ8N584 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
TTC39CQ8N584 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TTC39CQ8N584 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TTC39CQ8N584 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC39CQ8N584 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC39CQ8N584 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TTC39CQ8N584 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TTC39CQ8N584 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TTC39CQ8N584 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TTC39CQ8N584 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
TTC39CQ8N584 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TTC39CQ8N584 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
TTC39CQ8N584 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.46■■□□□ 1.19
TTC39CQ8N584 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.46■■□□□ 1.19
TTC39CQ8N584 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TTC39CQ8N584 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.46■■□□□ 1.19
TTC39CQ8N584 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TTC39CQ8N584 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TTC39CQ8N584 KRT16P2-201ENST00000414673 1423 ntBASIC22.46■■□□□ 1.19
TTC39CQ8N584 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TTC39CQ8N584 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.46■■□□□ 1.19
TTC39CQ8N584 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TTC39CQ8N584 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TTC39CQ8N584 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TTC39CQ8N584 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.45■■□□□ 1.19
TTC39CQ8N584 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
TTC39CQ8N584 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
TTC39CQ8N584 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.45■■□□□ 1.18
TTC39CQ8N584 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TTC39CQ8N584 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TTC39CQ8N584 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
TTC39CQ8N584 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.45■■□□□ 1.18
TTC39CQ8N584 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TTC39CQ8N584 SLC7A5P1-201ENST00000568957 537 ntBASIC22.45■■□□□ 1.18
TTC39CQ8N584 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TTC39CQ8N584 KRT18P61-201ENST00000585825 1298 ntBASIC22.45■■□□□ 1.18
TTC39CQ8N584 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.45■■□□□ 1.18
TTC39CQ8N584 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
TTC39CQ8N584 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TTC39CQ8N584 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
TTC39CQ8N584 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.44■■□□□ 1.18
TTC39CQ8N584 KRT18P11-201ENST00000435214 1283 ntBASIC22.44■■□□□ 1.18
TTC39CQ8N584 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.43■■□□□ 1.18
TTC39CQ8N584 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TTC39CQ8N584 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TTC39CQ8N584 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.43■■□□□ 1.18
TTC39CQ8N584 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
TTC39CQ8N584 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
TTC39CQ8N584 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TTC39CQ8N584 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TTC39CQ8N584 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
TTC39CQ8N584 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TTC39CQ8N584 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.43■■□□□ 1.18
TTC39CQ8N584 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TTC39CQ8N584 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC39CQ8N584 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.42■■□□□ 1.18
TTC39CQ8N584 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.42■■□□□ 1.18
TTC39CQ8N584 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TTC39CQ8N584 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC39CQ8N584 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC39CQ8N584 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TTC39CQ8N584 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.42■■□□□ 1.18
TTC39CQ8N584 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC39CQ8N584 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TTC39CQ8N584 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC39CQ8N584 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.41■■□□□ 1.18
TTC39CQ8N584 Z98882.1-201ENST00000622160 2253 ntBASIC22.41■■□□□ 1.18
TTC39CQ8N584 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC39CQ8N584 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TTC39CQ8N584 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.41■■□□□ 1.18
TTC39CQ8N584 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TTC39CQ8N584 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC39CQ8N584 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.41■■□□□ 1.18
TTC39CQ8N584 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC39CQ8N584 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.41■■□□□ 1.18
TTC39CQ8N584 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC39CQ8N584 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC39CQ8N584 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TTC39CQ8N584 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC39CQ8N584 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC39CQ8N584 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
TTC39CQ8N584 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
TTC39CQ8N584 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
TTC39CQ8N584 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC39CQ8N584 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.4■■□□□ 1.18
TTC39CQ8N584 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC39CQ8N584 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC39CQ8N584 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.4■■□□□ 1.18
TTC39CQ8N584 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.4■■□□□ 1.18
TTC39CQ8N584 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC39CQ8N584 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms