Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 CDCA4P2-201ENST00000441182 718 ntBASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 AC080038.1-201ENST00000611274 1154 ntBASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 AC011767.1-201ENST00000617410 1153 ntBASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 BID-214ENST00000617586 542 ntTSL 5 BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ARHGEF39Q8N4T4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 DUX4L16-201ENST00000555130 1264 ntBASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 AC008175.2-201ENST00000612840 297 ntBASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 AC073111.5-205ENST00000641717 521 ntBASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.97■□□□□ 0.79
ARHGEF39Q8N4T4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 KRT16P2-201ENST00000414673 1423 ntBASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARHGEF39Q8N4T4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF39Q8N4T4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF39Q8N4T4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ARHGEF39Q8N4T4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF39Q8N4T4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ARHGEF39Q8N4T4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF39Q8N4T4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.94■□□□□ 0.78
ARHGEF39Q8N4T4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.94■□□□□ 0.78
ARHGEF39Q8N4T4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.94■□□□□ 0.78
ARHGEF39Q8N4T4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF39Q8N4T4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF39Q8N4T4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF39Q8N4T4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.94■□□□□ 0.78
ARHGEF39Q8N4T4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 CNN2P6-201ENST00000439038 900 ntBASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 AC010536.3-201ENST00000620306 533 ntBASIC19.93■□□□□ 0.78
ARHGEF39Q8N4T4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms