Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 AC093323.1-202ENST00000635031 2045 ntBASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 AC060766.5-201ENST00000590539 871 ntBASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.09■□□□□ 0.81
COL27A1Q8IZC6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.08■□□□□ 0.81
COL27A1Q8IZC6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL27A1Q8IZC6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL27A1Q8IZC6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL27A1Q8IZC6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
COL27A1Q8IZC6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL27A1Q8IZC6 AC128676.1-201ENST00000454392 318 ntBASIC20.08■□□□□ 0.81
COL27A1Q8IZC6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.08■□□□□ 0.81
COL27A1Q8IZC6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
COL27A1Q8IZC6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL27A1Q8IZC6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
COL27A1Q8IZC6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 AL596275.1-201ENST00000423464 877 ntBASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 AL158047.1-201ENST00000445918 881 ntBASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 CYP2T3P-201ENST00000601990 817 ntBASIC20.07■□□□□ 0.8
COL27A1Q8IZC6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL27A1Q8IZC6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL27A1Q8IZC6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.06■□□□□ 0.8
COL27A1Q8IZC6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL27A1Q8IZC6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.06■□□□□ 0.8
COL27A1Q8IZC6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
COL27A1Q8IZC6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL27A1Q8IZC6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL27A1Q8IZC6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
COL27A1Q8IZC6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.06■□□□□ 0.8
COL27A1Q8IZC6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL27A1Q8IZC6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.06■□□□□ 0.8
COL27A1Q8IZC6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL27A1Q8IZC6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL27A1Q8IZC6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
COL27A1Q8IZC6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.05■□□□□ 0.8
COL27A1Q8IZC6 UNC93B4-201ENST00000505679 747 ntBASIC20.05■□□□□ 0.8
COL27A1Q8IZC6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL27A1Q8IZC6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.05■□□□□ 0.8
COL27A1Q8IZC6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.05■□□□□ 0.8
COL27A1Q8IZC6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL27A1Q8IZC6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COL27A1Q8IZC6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL27A1Q8IZC6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL27A1Q8IZC6 AC026471.6-201ENST00000622954 1905 ntBASIC20.05■□□□□ 0.8
COL27A1Q8IZC6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL27A1Q8IZC6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL27A1Q8IZC6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.05■□□□□ 0.8
COL27A1Q8IZC6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL27A1Q8IZC6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL27A1Q8IZC6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL27A1Q8IZC6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL27A1Q8IZC6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.04■□□□□ 0.8
COL27A1Q8IZC6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.04■□□□□ 0.8
COL27A1Q8IZC6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.04■□□□□ 0.8
COL27A1Q8IZC6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL27A1Q8IZC6 AL359736.2-201ENST00000621992 437 ntBASIC20.04■□□□□ 0.8
COL27A1Q8IZC6 FAM21FP-204ENST00000608637 956 ntBASIC20.03■□□□□ 0.8
COL27A1Q8IZC6 AC073648.6-201ENST00000641589 218 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms