Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 AC008175.2-201ENST00000612840 297 ntBASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
C9orf40Q8IXQ3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 AC004911.1-201ENST00000416316 871 ntBASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 KRT18P20-201ENST00000548986 1279 ntBASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 SLC7A5P2-201ENST00000553010 536 ntBASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
C9orf40Q8IXQ3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
C9orf40Q8IXQ3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
C9orf40Q8IXQ3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 POU5F1P4-201ENST00000413175 1085 ntBASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 KRT18P11-201ENST00000435214 1283 ntBASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
C9orf40Q8IXQ3 AC244015.2-201ENST00000616358 1861 ntBASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 MYCNOS-205ENST00000641950 531 ntBASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C9orf40Q8IXQ3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.49■□□□□ 0.71
C9orf40Q8IXQ3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.49■□□□□ 0.71
C9orf40Q8IXQ3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
C9orf40Q8IXQ3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
C9orf40Q8IXQ3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf40Q8IXQ3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.49■□□□□ 0.71
C9orf40Q8IXQ3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf40Q8IXQ3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.49■□□□□ 0.71
C9orf40Q8IXQ3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf40Q8IXQ3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.49■□□□□ 0.71
C9orf40Q8IXQ3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf40Q8IXQ3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf40Q8IXQ3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf40Q8IXQ3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf40Q8IXQ3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.48■□□□□ 0.71
C9orf40Q8IXQ3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms