Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SCUBE3Q8IX30 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SCUBE3Q8IX30 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.21■■□□□ 1.15
SCUBE3Q8IX30 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SCUBE3Q8IX30 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
SCUBE3Q8IX30 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.2■■□□□ 1.14
SCUBE3Q8IX30 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SCUBE3Q8IX30 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.2■■□□□ 1.14
SCUBE3Q8IX30 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.2■■□□□ 1.14
SCUBE3Q8IX30 AC090192.1-201ENST00000517740 490 ntBASIC22.2■■□□□ 1.14
SCUBE3Q8IX30 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.2■■□□□ 1.14
SCUBE3Q8IX30 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.2■■□□□ 1.14
SCUBE3Q8IX30 RARRES2P11-201ENST00000635158 484 ntBASIC22.2■■□□□ 1.14
SCUBE3Q8IX30 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SCUBE3Q8IX30 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SCUBE3Q8IX30 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
SCUBE3Q8IX30 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.2■■□□□ 1.14
SCUBE3Q8IX30 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.2■■□□□ 1.14
SCUBE3Q8IX30 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.2■■□□□ 1.14
SCUBE3Q8IX30 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.19■■□□□ 1.14
SCUBE3Q8IX30 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.19■■□□□ 1.14
SCUBE3Q8IX30 Z98882.1-201ENST00000622160 2253 ntBASIC22.19■■□□□ 1.14
SCUBE3Q8IX30 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
SCUBE3Q8IX30 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.19■■□□□ 1.14
SCUBE3Q8IX30 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCUBE3Q8IX30 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.19■■□□□ 1.14
SCUBE3Q8IX30 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.19■■□□□ 1.14
SCUBE3Q8IX30 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SCUBE3Q8IX30 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCUBE3Q8IX30 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCUBE3Q8IX30 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCUBE3Q8IX30 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCUBE3Q8IX30 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCUBE3Q8IX30 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.18■■□□□ 1.14
SCUBE3Q8IX30 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
SCUBE3Q8IX30 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SCUBE3Q8IX30 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCUBE3Q8IX30 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
SCUBE3Q8IX30 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.18■■□□□ 1.14
SCUBE3Q8IX30 AC138907.5-202ENST00000569484 235 ntBASIC22.18■■□□□ 1.14
SCUBE3Q8IX30 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
SCUBE3Q8IX30 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.18■■□□□ 1.14
SCUBE3Q8IX30 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 KRT19P1-201ENST00000405746 1186 ntBASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 AP001160.3-201ENST00000601484 763 ntBASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCUBE3Q8IX30 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCUBE3Q8IX30 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.16■■□□□ 1.14
SCUBE3Q8IX30 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCUBE3Q8IX30 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.16■■□□□ 1.14
SCUBE3Q8IX30 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCUBE3Q8IX30 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.16■■□□□ 1.14
SCUBE3Q8IX30 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.16■■□□□ 1.14
SCUBE3Q8IX30 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCUBE3Q8IX30 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SCUBE3Q8IX30 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SCUBE3Q8IX30 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCUBE3Q8IX30 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SCUBE3Q8IX30 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms