Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 AC120498.10-201ENST00000621827 505 ntBASIC23.57■■□□□ 1.36
TRIM50Q86XT4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.57■■□□□ 1.36
TRIM50Q86XT4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM50Q86XT4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.56■■□□□ 1.36
TRIM50Q86XT4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM50Q86XT4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.56■■□□□ 1.36
TRIM50Q86XT4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.56■■□□□ 1.36
TRIM50Q86XT4 AC007322.4-201ENST00000509611 723 ntBASIC23.56■■□□□ 1.36
TRIM50Q86XT4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.56■■□□□ 1.36
TRIM50Q86XT4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM50Q86XT4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.56■■□□□ 1.36
TRIM50Q86XT4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM50Q86XT4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM50Q86XT4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM50Q86XT4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 AC093787.1-201ENST00000450396 207 ntBASIC23.55■■□□□ 1.36
TRIM50Q86XT4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 AC016405.3-201ENST00000607710 860 ntBASIC23.55■■□□□ 1.36
TRIM50Q86XT4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM50Q86XT4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM50Q86XT4 FAM99A-202ENST00000538190 1989 ntBASIC23.54■■□□□ 1.36
TRIM50Q86XT4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM50Q86XT4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM50Q86XT4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM50Q86XT4 KRT16P2-201ENST00000414673 1423 ntBASIC23.54■■□□□ 1.36
TRIM50Q86XT4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM50Q86XT4 CD99P1-205ENST00000527459 561 ntBASIC23.54■■□□□ 1.36
TRIM50Q86XT4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM50Q86XT4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM50Q86XT4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.53■■□□□ 1.36
TRIM50Q86XT4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TRIM50Q86XT4 RBM17P2-201ENST00000616397 1405 ntBASIC23.53■■□□□ 1.36
TRIM50Q86XT4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM50Q86XT4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.53■■□□□ 1.36
TRIM50Q86XT4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.53■■□□□ 1.36
TRIM50Q86XT4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.53■■□□□ 1.36
TRIM50Q86XT4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.53■■□□□ 1.36
TRIM50Q86XT4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM50Q86XT4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM50Q86XT4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM50Q86XT4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM50Q86XT4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM50Q86XT4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM50Q86XT4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM50Q86XT4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM50Q86XT4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM50Q86XT4 AC069152.1-201ENST00000438030 544 ntBASIC23.52■■□□□ 1.36
TRIM50Q86XT4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM50Q86XT4 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.52■■□□□ 1.36
TRIM50Q86XT4 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.52■■□□□ 1.36
TRIM50Q86XT4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.52■■□□□ 1.36
TRIM50Q86XT4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.52■■□□□ 1.36
TRIM50Q86XT4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM50Q86XT4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
TRIM50Q86XT4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM50Q86XT4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms