Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.4■■□□□ 1.02
CROCCP2Q86T23 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CROCCP2Q86T23 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.4■■□□□ 1.02
CROCCP2Q86T23 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CROCCP2Q86T23 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CROCCP2Q86T23 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CROCCP2Q86T23 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
CROCCP2Q86T23 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CROCCP2Q86T23 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.39■■□□□ 1.02
CROCCP2Q86T23 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.39■■□□□ 1.02
CROCCP2Q86T23 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CROCCP2Q86T23 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CROCCP2Q86T23 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.39■■□□□ 1.01
CROCCP2Q86T23 AC004987.1-201ENST00000428627 508 ntBASIC21.39■■□□□ 1.01
CROCCP2Q86T23 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CROCCP2Q86T23 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.39■■□□□ 1.01
CROCCP2Q86T23 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CROCCP2Q86T23 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CROCCP2Q86T23 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.39■■□□□ 1.01
CROCCP2Q86T23 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.39■■□□□ 1.01
CROCCP2Q86T23 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
CROCCP2Q86T23 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.38■■□□□ 1.01
CROCCP2Q86T23 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
CROCCP2Q86T23 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.37■■□□□ 1.01
CROCCP2Q86T23 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CROCCP2Q86T23 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CROCCP2Q86T23 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CROCCP2Q86T23 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CROCCP2Q86T23 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CROCCP2Q86T23 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CROCCP2Q86T23 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.37■■□□□ 1.01
CROCCP2Q86T23 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.37■■□□□ 1.01
CROCCP2Q86T23 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CROCCP2Q86T23 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.37■■□□□ 1.01
CROCCP2Q86T23 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CROCCP2Q86T23 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.37■■□□□ 1.01
CROCCP2Q86T23 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.37■■□□□ 1.01
CROCCP2Q86T23 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CROCCP2Q86T23 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CROCCP2Q86T23 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CROCCP2Q86T23 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CROCCP2Q86T23 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CROCCP2Q86T23 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.36■■□□□ 1.01
CROCCP2Q86T23 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
CROCCP2Q86T23 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.36■■□□□ 1.01
CROCCP2Q86T23 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CROCCP2Q86T23 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.36■■□□□ 1.01
CROCCP2Q86T23 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.36■■□□□ 1.01
CROCCP2Q86T23 AC103724.3-201ENST00000564481 992 ntBASIC21.36■■□□□ 1.01
CROCCP2Q86T23 AC241377.3-202ENST00000626088 1088 ntBASIC21.36■■□□□ 1.01
CROCCP2Q86T23 AC241585.3-202ENST00000628937 1088 ntBASIC21.36■■□□□ 1.01
CROCCP2Q86T23 AC245100.8-202ENST00000629247 1058 ntBASIC21.36■■□□□ 1.01
CROCCP2Q86T23 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
CROCCP2Q86T23 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 YBX1P4-201ENST00000392794 808 ntBASIC21.35■■□□□ 1.01
CROCCP2Q86T23 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 ABHD17AP5-201ENST00000580133 923 ntBASIC21.35■■□□□ 1.01
CROCCP2Q86T23 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 AC003102.1-202ENST00000563394 1796 ntBASIC21.35■■□□□ 1.01
CROCCP2Q86T23 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CROCCP2Q86T23 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CROCCP2Q86T23 AC133637.1-201ENST00000624115 1537 ntBASIC21.34■■□□□ 1.01
CROCCP2Q86T23 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.34■■□□□ 1.01
CROCCP2Q86T23 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.34■■□□□ 1.01
CROCCP2Q86T23 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.34■■□□□ 1.01
CROCCP2Q86T23 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms