Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 LINC01960-201ENST00000563759 1884 ntBASIC18■□□□□ 0.47
CSMD2Q7Z408 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CSMD2Q7Z408 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CSMD2Q7Z408 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CSMD2Q7Z408 AP004607.7-201ENST00000527152 1677 ntBASIC18■□□□□ 0.47
CSMD2Q7Z408 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18■□□□□ 0.47
CSMD2Q7Z408 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18■□□□□ 0.47
CSMD2Q7Z408 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CSMD2Q7Z408 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
CSMD2Q7Z408 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CSMD2Q7Z408 AP003733.4-201ENST00000623785 1697 ntBASIC17.99■□□□□ 0.47
CSMD2Q7Z408 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 AC087499.1-201ENST00000418141 1075 ntBASIC17.99■□□□□ 0.47
CSMD2Q7Z408 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 HLA-B-256ENST00000639848 1089 ntBASIC17.99■□□□□ 0.47
CSMD2Q7Z408 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.99■□□□□ 0.47
CSMD2Q7Z408 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.98■□□□□ 0.47
CSMD2Q7Z408 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSMD2Q7Z408 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CSMD2Q7Z408 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.98■□□□□ 0.47
CSMD2Q7Z408 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.98■□□□□ 0.47
CSMD2Q7Z408 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.98■□□□□ 0.47
CSMD2Q7Z408 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSMD2Q7Z408 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
CSMD2Q7Z408 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.98■□□□□ 0.47
CSMD2Q7Z408 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSMD2Q7Z408 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 RN7SL471P-201ENST00000580476 299 ntBASIC17.97■□□□□ 0.47
CSMD2Q7Z408 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 RBM17P2-201ENST00000616397 1405 ntBASIC17.97■□□□□ 0.47
CSMD2Q7Z408 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 AL355075.4-201ENST00000554988 638 ntBASIC17.97■□□□□ 0.47
CSMD2Q7Z408 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSMD2Q7Z408 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 POU5F1P4-201ENST00000413175 1085 ntBASIC17.96■□□□□ 0.47
CSMD2Q7Z408 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 AC060766.5-201ENST00000590539 871 ntBASIC17.96■□□□□ 0.47
CSMD2Q7Z408 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 AL355472.2-201ENST00000422958 438 ntBASIC17.96■□□□□ 0.47
CSMD2Q7Z408 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CSMD2Q7Z408 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD2Q7Z408 ARMC10P1-201ENST00000313754 855 ntBASIC17.95■□□□□ 0.46
CSMD2Q7Z408 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
CSMD2Q7Z408 PNMA6B-201ENST00000538162 1200 ntBASIC17.95■□□□□ 0.46
CSMD2Q7Z408 MIR4785-201ENST00000585005 73 ntBASIC17.95■□□□□ 0.46
CSMD2Q7Z408 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD2Q7Z408 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD2Q7Z408 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD2Q7Z408 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CSMD2Q7Z408 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD2Q7Z408 AC092368.3-202ENST00000574180 1591 ntBASIC17.95■□□□□ 0.46
CSMD2Q7Z408 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD2Q7Z408 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD2Q7Z408 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD2Q7Z408 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
CSMD2Q7Z408 AC145285.6-201ENST00000604632 637 ntBASIC17.95■□□□□ 0.46
CSMD2Q7Z408 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.95■□□□□ 0.46
CSMD2Q7Z408 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.95■□□□□ 0.46
CSMD2Q7Z408 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms