Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 AC233992.3-201ENST00000607491 485 ntBASIC19.23■□□□□ 0.67
ZNF544Q6NX49 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ZNF544Q6NX49 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.22■□□□□ 0.67
ZNF544Q6NX49 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 AC099791.1-201ENST00000416440 715 ntBASIC19.22■□□□□ 0.67
ZNF544Q6NX49 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 FAM99A-202ENST00000538190 1989 ntBASIC19.22■□□□□ 0.67
ZNF544Q6NX49 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
ZNF544Q6NX49 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 AL157384.1-201ENST00000445995 2473 ntBASIC19.21■□□□□ 0.67
ZNF544Q6NX49 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.21■□□□□ 0.67
ZNF544Q6NX49 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF544Q6NX49 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
ZNF544Q6NX49 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF544Q6NX49 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF544Q6NX49 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF544Q6NX49 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF544Q6NX49 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF544Q6NX49 RARRES2P6-201ENST00000567333 442 ntBASIC19.2■□□□□ 0.66
ZNF544Q6NX49 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF544Q6NX49 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF544Q6NX49 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ZNF544Q6NX49 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF544Q6NX49 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF544Q6NX49 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
ZNF544Q6NX49 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ZNF544Q6NX49 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF544Q6NX49 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ZNF544Q6NX49 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ZNF544Q6NX49 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ZNF544Q6NX49 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF544Q6NX49 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF544Q6NX49 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF544Q6NX49 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
ZNF544Q6NX49 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF544Q6NX49 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ZNF544Q6NX49 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF544Q6NX49 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF544Q6NX49 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF544Q6NX49 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms