Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LYSMD4Q5XG99 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.83■□□□□ 0.92
LYSMD4Q5XG99 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LYSMD4Q5XG99 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LYSMD4Q5XG99 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
LYSMD4Q5XG99 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.83■□□□□ 0.92
LYSMD4Q5XG99 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.83■□□□□ 0.92
LYSMD4Q5XG99 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.82■□□□□ 0.92
LYSMD4Q5XG99 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD4Q5XG99 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LYSMD4Q5XG99 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.82■□□□□ 0.92
LYSMD4Q5XG99 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.82■□□□□ 0.92
LYSMD4Q5XG99 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.82■□□□□ 0.92
LYSMD4Q5XG99 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 AC008550.1-201ENST00000511500 884 ntBASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 KRT17P1-201ENST00000399211 1546 ntBASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LYSMD4Q5XG99 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 AL355472.2-201ENST00000422958 438 ntBASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 AC087742.1-201ENST00000575880 1738 ntBASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LYSMD4Q5XG99 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 UBE2SP1-201ENST00000450587 669 ntBASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 FAM21FP-204ENST00000608637 956 ntBASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LYSMD4Q5XG99 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 AC139530.1-201ENST00000575312 1977 ntBASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 CDV3P1-201ENST00000471403 739 ntBASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 AC060766.5-201ENST00000590539 871 ntBASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.78■□□□□ 0.92
LYSMD4Q5XG99 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LYSMD4Q5XG99 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LYSMD4Q5XG99 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.77■□□□□ 0.92
LYSMD4Q5XG99 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
LYSMD4Q5XG99 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms