Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC24.22■■□□□ 1.47
COL13A1Q5TAT6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.22■■□□□ 1.47
COL13A1Q5TAT6 SLC25A3P1-201ENST00000443844 931 ntBASIC24.22■■□□□ 1.47
COL13A1Q5TAT6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC24.22■■□□□ 1.47
COL13A1Q5TAT6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC24.22■■□□□ 1.47
COL13A1Q5TAT6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC24.22■■□□□ 1.47
COL13A1Q5TAT6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL13A1Q5TAT6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC24.22■■□□□ 1.47
COL13A1Q5TAT6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC24.22■■□□□ 1.47
COL13A1Q5TAT6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 AC006011.2-201ENST00000621313 1158 ntBASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
COL13A1Q5TAT6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
COL13A1Q5TAT6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
COL13A1Q5TAT6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
COL13A1Q5TAT6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
COL13A1Q5TAT6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 KRT18P22-201ENST00000402024 1347 ntBASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 KRASP1-201ENST00000407852 552 ntBASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 AC246785.2-201ENST00000432512 513 ntBASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
COL13A1Q5TAT6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL13A1Q5TAT6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL13A1Q5TAT6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.19■■□□□ 1.46
COL13A1Q5TAT6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
COL13A1Q5TAT6 SAPCD2P4-201ENST00000424595 1171 ntBASIC24.19■■□□□ 1.46
COL13A1Q5TAT6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL13A1Q5TAT6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC24.19■■□□□ 1.46
COL13A1Q5TAT6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC24.19■■□□□ 1.46
COL13A1Q5TAT6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC24.19■■□□□ 1.46
COL13A1Q5TAT6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
COL13A1Q5TAT6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL13A1Q5TAT6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.19■■□□□ 1.46
COL13A1Q5TAT6 SLC6A10P-202ENST00000431994 2058 ntBASIC24.19■■□□□ 1.46
COL13A1Q5TAT6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL13A1Q5TAT6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.18■■□□□ 1.46
COL13A1Q5TAT6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL13A1Q5TAT6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL13A1Q5TAT6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
COL13A1Q5TAT6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
COL13A1Q5TAT6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.18■■□□□ 1.46
COL13A1Q5TAT6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL13A1Q5TAT6 KRT18P16-201ENST00000510337 1294 ntBASIC24.18■■□□□ 1.46
COL13A1Q5TAT6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
COL13A1Q5TAT6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL13A1Q5TAT6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.18■■□□□ 1.46
COL13A1Q5TAT6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL13A1Q5TAT6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
COL13A1Q5TAT6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.17■■□□□ 1.46
COL13A1Q5TAT6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.17■■□□□ 1.46
COL13A1Q5TAT6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
COL13A1Q5TAT6 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.17■■□□□ 1.46
COL13A1Q5TAT6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC24.17■■□□□ 1.46
COL13A1Q5TAT6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.17■■□□□ 1.46
COL13A1Q5TAT6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
COL13A1Q5TAT6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
COL13A1Q5TAT6 AL691432.3-201ENST00000621860 400 ntBASIC24.17■■□□□ 1.46
COL13A1Q5TAT6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL13A1Q5TAT6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL13A1Q5TAT6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
COL13A1Q5TAT6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.16■■□□□ 1.46
COL13A1Q5TAT6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
COL13A1Q5TAT6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC24.16■■□□□ 1.46
COL13A1Q5TAT6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC24.16■■□□□ 1.46
COL13A1Q5TAT6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL13A1Q5TAT6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC24.16■■□□□ 1.46
COL13A1Q5TAT6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL13A1Q5TAT6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL13A1Q5TAT6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC24.16■■□□□ 1.46
COL13A1Q5TAT6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC24.15■■□□□ 1.46
COL13A1Q5TAT6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL13A1Q5TAT6 AC079598.2-202ENST00000546624 1451 ntBASIC24.15■■□□□ 1.46
COL13A1Q5TAT6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL13A1Q5TAT6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms