Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.41■■□□□ 1.18
VARS2Q5ST30 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.41■■□□□ 1.18
VARS2Q5ST30 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.41■■□□□ 1.18
VARS2Q5ST30 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.41■■□□□ 1.18
VARS2Q5ST30 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VARS2Q5ST30 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
VARS2Q5ST30 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VARS2Q5ST30 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
VARS2Q5ST30 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
VARS2Q5ST30 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VARS2Q5ST30 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.41■■□□□ 1.18
VARS2Q5ST30 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.4■■□□□ 1.18
VARS2Q5ST30 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VARS2Q5ST30 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VARS2Q5ST30 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.4■■□□□ 1.18
VARS2Q5ST30 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VARS2Q5ST30 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.4■■□□□ 1.18
VARS2Q5ST30 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.4■■□□□ 1.18
VARS2Q5ST30 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
VARS2Q5ST30 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.4■■□□□ 1.18
VARS2Q5ST30 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.4■■□□□ 1.18
VARS2Q5ST30 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VARS2Q5ST30 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VARS2Q5ST30 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VARS2Q5ST30 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VARS2Q5ST30 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VARS2Q5ST30 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.39■■□□□ 1.18
VARS2Q5ST30 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
VARS2Q5ST30 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.39■■□□□ 1.17
VARS2Q5ST30 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VARS2Q5ST30 OR10C1-204ENST00000622521 1039 ntBASIC22.39■■□□□ 1.17
VARS2Q5ST30 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.39■■□□□ 1.17
VARS2Q5ST30 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VARS2Q5ST30 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VARS2Q5ST30 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
VARS2Q5ST30 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
VARS2Q5ST30 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.38■■□□□ 1.17
VARS2Q5ST30 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
VARS2Q5ST30 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
VARS2Q5ST30 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VARS2Q5ST30 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
VARS2Q5ST30 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
VARS2Q5ST30 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
VARS2Q5ST30 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.38■■□□□ 1.17
VARS2Q5ST30 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.38■■□□□ 1.17
VARS2Q5ST30 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
VARS2Q5ST30 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.38■■□□□ 1.17
VARS2Q5ST30 AC016405.3-201ENST00000607710 860 ntBASIC22.38■■□□□ 1.17
VARS2Q5ST30 AC008694.1-202ENST00000636953 945 ntBASIC22.38■■□□□ 1.17
VARS2Q5ST30 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
VARS2Q5ST30 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.38■■□□□ 1.17
VARS2Q5ST30 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VARS2Q5ST30 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
VARS2Q5ST30 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VARS2Q5ST30 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
VARS2Q5ST30 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.37■■□□□ 1.17
VARS2Q5ST30 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
VARS2Q5ST30 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.37■■□□□ 1.17
VARS2Q5ST30 AC069152.1-201ENST00000438030 544 ntBASIC22.37■■□□□ 1.17
VARS2Q5ST30 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.37■■□□□ 1.17
VARS2Q5ST30 AC093787.1-201ENST00000450396 207 ntBASIC22.37■■□□□ 1.17
VARS2Q5ST30 TSPY20P-201ENST00000450910 630 ntBASIC22.37■■□□□ 1.17
VARS2Q5ST30 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
VARS2Q5ST30 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
VARS2Q5ST30 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.37■■□□□ 1.17
VARS2Q5ST30 AC069236.1-201ENST00000604339 616 ntBASIC22.37■■□□□ 1.17
VARS2Q5ST30 AC243732.1-201ENST00000612648 864 ntBASIC22.37■■□□□ 1.17
VARS2Q5ST30 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.37■■□□□ 1.17
VARS2Q5ST30 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.37■■□□□ 1.17
VARS2Q5ST30 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.37■■□□□ 1.17
VARS2Q5ST30 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.37■■□□□ 1.17
VARS2Q5ST30 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
VARS2Q5ST30 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
VARS2Q5ST30 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
VARS2Q5ST30 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
VARS2Q5ST30 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VARS2Q5ST30 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
VARS2Q5ST30 MKRN4P-201ENST00000444706 1521 ntBASIC22.36■■□□□ 1.17
VARS2Q5ST30 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.36■■□□□ 1.17
VARS2Q5ST30 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
VARS2Q5ST30 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
VARS2Q5ST30 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
VARS2Q5ST30 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
VARS2Q5ST30 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
VARS2Q5ST30 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
VARS2Q5ST30 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
VARS2Q5ST30 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
VARS2Q5ST30 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
VARS2Q5ST30 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VARS2Q5ST30 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.36■■□□□ 1.17
VARS2Q5ST30 AC098934.4-201ENST00000564127 592 ntBASIC22.36■■□□□ 1.17
VARS2Q5ST30 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
VARS2Q5ST30 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
VARS2Q5ST30 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VARS2Q5ST30 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VARS2Q5ST30 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VARS2Q5ST30 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
VARS2Q5ST30 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
VARS2Q5ST30 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
VARS2Q5ST30 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms