Protein–RNA interactions for Protein: Q5FWE3

PRRT3, Proline-rich transmembrane protein 3, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT3Q5FWE3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRRT3Q5FWE3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.69■□□□□ 0.9
PRRT3Q5FWE3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRRT3Q5FWE3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.69■□□□□ 0.9
PRRT3Q5FWE3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRRT3Q5FWE3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
PRRT3Q5FWE3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.69■□□□□ 0.9
PRRT3Q5FWE3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRRT3Q5FWE3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PRRT3Q5FWE3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRRT3Q5FWE3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRRT3Q5FWE3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 KRT16P2-201ENST00000414673 1423 ntBASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 AC233723.2-201ENST00000623798 2106 ntBASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRRT3Q5FWE3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 ABHD17AP1-201ENST00000358206 933 ntBASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 AC008694.1-202ENST00000636953 945 ntBASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 AC061975.6-201ENST00000579045 1553 ntBASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.67■□□□□ 0.9
PRRT3Q5FWE3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 AC069152.1-201ENST00000438030 544 ntBASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 KRT18P6-201ENST00000555540 1265 ntBASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRRT3Q5FWE3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 AC069236.1-201ENST00000604339 616 ntBASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 AC133041.1-202ENST00000642053 222 ntBASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 GUSBP5-202ENST00000510805 1989 ntBASIC20.65■□□□□ 0.9
PRRT3Q5FWE3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRRT3Q5FWE3 MKRN4P-201ENST00000444706 1521 ntBASIC20.64■□□□□ 0.9
PRRT3Q5FWE3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRRT3Q5FWE3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRRT3Q5FWE3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRRT3Q5FWE3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRRT3Q5FWE3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRRT3Q5FWE3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.64■□□□□ 0.89
PRRT3Q5FWE3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms