Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 MER1YNL210W 813 nt3.11□□□□□ -1.91
DNL4Q08387 TRM112YNR046W 408 nt3.11□□□□□ -1.91
DNL4Q08387 SFG1YOR315W 1041 nt3.11□□□□□ -1.91
DNL4Q08387 YSP2YDR326C 4317 nt3.11□□□□□ -1.91
DNL4Q08387 ECM18YDR125C 1362 nt3.11□□□□□ -1.91
DNL4Q08387 HEH2YDR458C 1992 nt3.11□□□□□ -1.91
DNL4Q08387 PIN4YBL051C 2007 nt3.1□□□□□ -1.91
DNL4Q08387 TFB2YPL122C 1542 nt3.1□□□□□ -1.91
DNL4Q08387 YLR278CYLR278C 4026 nt3.1□□□□□ -1.91
DNL4Q08387 TSC13YDL015C 933 nt3.1□□□□□ -1.91
DNL4Q08387 RMT2YDR465C 1239 nt3.1□□□□□ -1.91
DNL4Q08387 YDR535CYDR535C 501 nt3.1□□□□□ -1.91
DNL4Q08387 GPP2YER062C 753 nt3.1□□□□□ -1.91
DNL4Q08387 YJL047C-AYJL047C-A 135 nt3.1□□□□□ -1.91
DNL4Q08387 IME1YJR094C 1083 nt3.1□□□□□ -1.91
DNL4Q08387 YLR307C-AYLR307C-A 264 nt3.1□□□□□ -1.91
DNL4Q08387 SPC2YML055W 537 nt3.1□□□□□ -1.91
DNL4Q08387 HHF1YBR009C 312 nt3.1□□□□□ -1.91
DNL4Q08387 snR44snR44 211 nt3.1□□□□□ -1.91
DNL4Q08387 RDS2YPL133C 1341 nt3.1□□□□□ -1.91
DNL4Q08387 SEC15YGL233W 2733 nt3.1□□□□□ -1.91
DNL4Q08387 BNA4YBL098W 1383 nt3.1□□□□□ -1.91
DNL4Q08387 ART10YLR392C 1557 nt3.09□□□□□ -1.91
DNL4Q08387 YJR061WYJR061W 2808 nt3.09□□□□□ -1.91
DNL4Q08387 HRD1YOL013C 1656 nt3.09□□□□□ -1.91
DNL4Q08387 YDL158CYDL158C 309 nt3.09□□□□□ -1.91
DNL4Q08387 YFL051CYFL051C 483 nt3.09□□□□□ -1.91
DNL4Q08387 TAN1YGL232W 870 nt3.09□□□□□ -1.91
DNL4Q08387 RPS23AYGR118W 438 nt3.09□□□□□ -1.91
DNL4Q08387 YGR190CYGR190C 366 nt3.09□□□□□ -1.91
DNL4Q08387 SNX4YJL036W 1272 nt3.09□□□□□ -1.91
DNL4Q08387 TDA8YAL064C-A 381 nt3.09□□□□□ -1.91
DNL4Q08387 YOR097CYOR097C 528 nt3.09□□□□□ -1.91
DNL4Q08387 YPL035CYPL035C 348 nt3.09□□□□□ -1.91
DNL4Q08387 RPS23BYPR132W 438 nt3.09□□□□□ -1.91
DNL4Q08387 JSN1YJR091C 3276 nt3.08□□□□□ -1.92
DNL4Q08387 NAB6YML117W 3405 nt3.08□□□□□ -1.92
DNL4Q08387 RIF1YBR275C 5751 nt3.08□□□□□ -1.92
DNL4Q08387 PHO81YGR233C 3537 nt3.08□□□□□ -1.92
DNL4Q08387 SNU23YDL098C 585 nt3.08□□□□□ -1.92
DNL4Q08387 GPI14YJR013W 1212 nt3.08□□□□□ -1.92
DNL4Q08387 YLR230WYLR230W 306 nt3.08□□□□□ -1.92
DNL4Q08387 GPN3YLR243W 819 nt3.08□□□□□ -1.92
DNL4Q08387 RDN58-1RDN58-1 158 nt3.08□□□□□ -1.92
DNL4Q08387 RDN58-2RDN58-2 158 nt3.08□□□□□ -1.92
DNL4Q08387 RPL6AYML073C 531 nt3.08□□□□□ -1.92
DNL4Q08387 DUG3YNL191W 1074 nt3.08□□□□□ -1.92
DNL4Q08387 ATG3YNR007C 933 nt3.08□□□□□ -1.92
DNL4Q08387 RPS10AYOR293W 318 nt3.08□□□□□ -1.92
DNL4Q08387 SAD1YFR005C 1347 nt3.08□□□□□ -1.92
DNL4Q08387 SEC27YGL137W 2670 nt3.08□□□□□ -1.92
DNL4Q08387 CHS2YBR038W 2892 nt3.08□□□□□ -1.92
DNL4Q08387 DBP7YKR024C 2229 nt3.08□□□□□ -1.92
DNL4Q08387 YML096WYML096W 1578 nt3.08□□□□□ -1.92
DNL4Q08387 RAD55YDR076W 1221 nt3.07□□□□□ -1.92
DNL4Q08387 CBS2YDR197W 1170 nt3.07□□□□□ -1.92
DNL4Q08387 GRX2YDR513W 432 nt3.07□□□□□ -1.92
DNL4Q08387 YGR111WYGR111W 1203 nt3.07□□□□□ -1.92
DNL4Q08387 YLR290CYLR290C 834 nt3.07□□□□□ -1.92
DNL4Q08387 GLO1YML004C 981 nt3.07□□□□□ -1.92
DNL4Q08387 SMA2YML066C 1110 nt3.07□□□□□ -1.92
DNL4Q08387 PHO88YBR106W 567 nt3.07□□□□□ -1.92
DNL4Q08387 YNR066CYNR066C 1311 nt3.07□□□□□ -1.92
DNL4Q08387 ITT1YML068W 1395 nt3.07□□□□□ -1.92
DNL4Q08387 CBP2YHL038C 1893 nt3.07□□□□□ -1.92
DNL4Q08387 FRE8YLR047C 2061 nt3.07□□□□□ -1.92
DNL4Q08387 FRE2YKL220C 2136 nt3.07□□□□□ -1.92
DNL4Q08387 LRS4YDR439W 1044 nt3.06□□□□□ -1.92
DNL4Q08387 SMT3YDR510W 306 nt3.06□□□□□ -1.92
DNL4Q08387 NMD2YHR077C 3270 nt3.06□□□□□ -1.92
DNL4Q08387 PFS1YHR185C 714 nt3.06□□□□□ -1.92
DNL4Q08387 Q0255Q0255 1419 nt3.06□□□□□ -1.92
DNL4Q08387 YIL169CYIL169C 2988 nt3.06□□□□□ -1.92
DNL4Q08387 VPS25YJR102C 609 nt3.06□□□□□ -1.92
DNL4Q08387 STD1YOR047C 1335 nt3.06□□□□□ -1.92
DNL4Q08387 CCL1YPR025C 1182 nt3.06□□□□□ -1.92
DNL4Q08387 YPR050CYPR050C 414 nt3.06□□□□□ -1.92
DNL4Q08387 PBP2YBR233W 1242 nt3.06□□□□□ -1.92
DNL4Q08387 VIP1YLR410W 3441 nt3.06□□□□□ -1.92
DNL4Q08387 POL2YNL262W 6669 nt3.06□□□□□ -1.92
DNL4Q08387 VBA4YDR119W 2307 nt3.05□□□□□ -1.92
DNL4Q08387 BUD4YJR092W 4344 nt3.05□□□□□ -1.92
DNL4Q08387 INP52YNL106C 3552 nt3.05□□□□□ -1.92
DNL4Q08387 YFR057WYFR057W 456 nt3.05□□□□□ -1.92
DNL4Q08387 YIL024CYIL024C 570 nt3.05□□□□□ -1.92
DNL4Q08387 PSF2YJL072C 642 nt3.05□□□□□ -1.92
DNL4Q08387 RFA3YJL173C 369 nt3.05□□□□□ -1.92
DNL4Q08387 NDC80YIL144W 2076 nt3.05□□□□□ -1.92
DNL4Q08387 XRN1YGL173C 4587 nt3.05□□□□□ -1.92
DNL4Q08387 BUB1YGR188C 3066 nt3.04□□□□□ -1.92
DNL4Q08387 ILS1YBL076C 3219 nt3.04□□□□□ -1.92
DNL4Q08387 YGL204CYGL204C 306 nt3.04□□□□□ -1.92
DNL4Q08387 RPS25AYGR027C 327 nt3.04□□□□□ -1.92
DNL4Q08387 PTI1YGR156W 1278 nt3.04□□□□□ -1.92
DNL4Q08387 CPR7YJR032W 1182 nt3.04□□□□□ -1.92
DNL4Q08387 SEC14YMR079W 915 nt3.04□□□□□ -1.92
DNL4Q08387 END3YNL084C 1050 nt3.04□□□□□ -1.92
DNL4Q08387 snR11snR11 258 nt3.04□□□□□ -1.92
DNL4Q08387 TUM1YOR251C 915 nt3.04□□□□□ -1.92
DNL4Q08387 YPR053CYPR053C 456 nt3.04□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 24.6 ms