Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 HTA1YDR225W 399 nt2.6□□□□□ -1.99
RRP40Q08285 RPL27AYHR010W 411 nt2.6□□□□□ -1.99
RRP40Q08285 YKR011CYKR011C 1062 nt2.6□□□□□ -1.99
RRP40Q08285 YKR033CYKR033C 426 nt2.6□□□□□ -1.99
RRP40Q08285 PRE8YML092C 753 nt2.6□□□□□ -1.99
RRP40Q08285 RUF20RUF20 443 nt2.6□□□□□ -1.99
RRP40Q08285 YNR068CYNR068C 819 nt2.6□□□□□ -1.99
RRP40Q08285 YJR061WYJR061W 2808 nt2.6□□□□□ -1.99
RRP40Q08285 SKT5YBL061C 2091 nt2.6□□□□□ -1.99
RRP40Q08285 SPP382YLR424W 2127 nt2.6□□□□□ -1.99
RRP40Q08285 SEC7YDR170C 6030 nt2.59□□□□□ -1.99
RRP40Q08285 DUN1YDL101C 1542 nt2.59□□□□□ -1.99
RRP40Q08285 YLL037WYLL037W 381 nt2.59□□□□□ -1.99
RRP40Q08285 JIP3YLR331C 378 nt2.59□□□□□ -1.99
RRP40Q08285 RPS10BYMR230W 318 nt2.59□□□□□ -1.99
RRP40Q08285 AAR2YBL074C 1068 nt2.59□□□□□ -1.99
RRP40Q08285 ATG5YPL149W 885 nt2.59□□□□□ -1.99
RRP40Q08285 YPR027CYPR027C 834 nt2.59□□□□□ -1.99
RRP40Q08285 TCB2YNL087W 3537 nt2.59□□□□□ -1.99
RRP40Q08285 YLR446WYLR446W 1302 nt2.59□□□□□ -2
RRP40Q08285 MYO5YMR109W 3660 nt2.59□□□□□ -2
RRP40Q08285 VPS3YDR495C 3036 nt2.59□□□□□ -2
RRP40Q08285 UBP8YMR223W 1416 nt2.59□□□□□ -2
RRP40Q08285 YGR067CYGR067C 2415 nt2.58□□□□□ -2
RRP40Q08285 RIM1YCR028C-A 408 nt2.58□□□□□ -2
RRP40Q08285 GPI14YJR013W 1212 nt2.58□□□□□ -2
RRP40Q08285 EAF7YNL136W 1278 nt2.58□□□□□ -2
RRP40Q08285 ATP11YNL315C 957 nt2.58□□□□□ -2
RRP40Q08285 YOR062CYOR062C 807 nt2.58□□□□□ -2
RRP40Q08285 YOR114WYOR114W 885 nt2.58□□□□□ -2
RRP40Q08285 SYC1YOR179C 567 nt2.58□□□□□ -2
RRP40Q08285 VAC8YEL013W 1737 nt2.58□□□□□ -2
RRP40Q08285 PFF1YBR074W 2931 nt2.58□□□□□ -2
RRP40Q08285 YDL050CYDL050C 372 nt2.57□□□□□ -2
RRP40Q08285 YEL075CYEL075C 369 nt2.57□□□□□ -2
RRP40Q08285 YGR018CYGR018C 330 nt2.57□□□□□ -2
RRP40Q08285 YGR114CYGR114C 390 nt2.57□□□□□ -2
RRP40Q08285 YGR121W-AYGR121W-A 216 nt2.57□□□□□ -2
RRP40Q08285 GLG2YJL137C 1143 nt2.57□□□□□ -2
RRP40Q08285 FIP1YJR093C 984 nt2.57□□□□□ -2
RRP40Q08285 ENV10YLR065C 546 nt2.57□□□□□ -2
RRP40Q08285 YMR178WYMR178W 825 nt2.57□□□□□ -2
RRP40Q08285 MCA1YOR197W 1299 nt2.57□□□□□ -2
RRP40Q08285 LDH1YBR204C 1128 nt2.57□□□□□ -2
RRP40Q08285 FLO11YIR019C 4104 nt2.57□□□□□ -2
RRP40Q08285 TRA1YHR099W 11235 nt2.57□□□□□ -2
RRP40Q08285 YHR078WYHR078W 1659 nt2.57□□□□□ -2
RRP40Q08285 VPS64YDR200C 1815 nt2.56□□□□□ -2
RRP40Q08285 MNT3YIL014W 1893 nt2.56□□□□□ -2
RRP40Q08285 ECM29YHL030W 5607 nt2.56□□□□□ -2
RRP40Q08285 YGL006W-AYGL006W-A 111 nt2.56□□□□□ -2
RRP40Q08285 RPS25AYGR027C 327 nt2.56□□□□□ -2
RRP40Q08285 YAL031W-AYAL031W-A 309 nt2.56□□□□□ -2
RRP40Q08285 APD1YBR151W 951 nt2.56□□□□□ -2
RRP40Q08285 YPL150WYPL150W 2706 nt2.56□□□□□ -2
RRP40Q08285 VPS9YML097C 1356 nt2.56□□□□□ -2
RRP40Q08285 PDC2YDR081C 2778 nt2.56□□□□□ -2
RRP40Q08285 SPH1YLR313C 1593 nt2.56□□□□□ -2
RRP40Q08285 SLP1YOR154W 1764 nt2.56□□□□□ -2
RRP40Q08285 PBS2YJL128C 2007 nt2.56□□□□□ -2
RRP40Q08285 ERP3YDL018C 678 nt2.55□□□□□ -2
RRP40Q08285 EFG1YGR271C-A 702 nt2.55□□□□□ -2
RRP40Q08285 YIL161WYIL161W 708 nt2.55□□□□□ -2
RRP40Q08285 SIC1YLR079W 855 nt2.55□□□□□ -2
RRP40Q08285 POP8YBL018C 402 nt2.55□□□□□ -2
RRP40Q08285 CIK1YMR198W 1785 nt2.55□□□□□ -2
RRP40Q08285 YNL109WYNL109W 546 nt2.55□□□□□ -2
RRP40Q08285 DIA2YOR080W 2199 nt2.55□□□□□ -2
RRP40Q08285 POL30YBR088C 777 nt2.55□□□□□ -2
RRP40Q08285 PBP2YBR233W 1242 nt2.55□□□□□ -2
RRP40Q08285 NMA111YNL123W 2994 nt2.55□□□□□ -2
RRP40Q08285 TOM70YNL121C 1854 nt2.54□□□□□ -2
RRP40Q08285 FIN1YDR130C 876 nt2.54□□□□□ -2
RRP40Q08285 YDR535CYDR535C 501 nt2.54□□□□□ -2
RRP40Q08285 ARI1YGL157W 1044 nt2.54□□□□□ -2
RRP40Q08285 LCL1YPL056C 306 nt2.54□□□□□ -2
RRP40Q08285 YPL276WYPL276W 438 nt2.54□□□□□ -2
RRP40Q08285 SPP381YBR152W 876 nt2.54□□□□□ -2
RRP40Q08285 MET5YJR137C 4329 nt2.54□□□□□ -2
RRP40Q08285 TPO5YKL174C 1857 nt2.54□□□□□ -2
RRP40Q08285 NSA1YGL111W 1392 nt2.53□□□□□ -2
RRP40Q08285 RNH202YDR279W 1053 nt2.53□□□□□ -2
RRP40Q08285 YGR073CYGR073C 372 nt2.53□□□□□ -2
RRP40Q08285 MPC3YGR243W 441 nt2.53□□□□□ -2
RRP40Q08285 LAC1YKL008C 1257 nt2.53□□□□□ -2
RRP40Q08285 YKL162CYKL162C 1209 nt2.53□□□□□ -2
RRP40Q08285 TDA8YAL064C-A 381 nt2.53□□□□□ -2
RRP40Q08285 FIG1YBR040W 897 nt2.53□□□□□ -2
RRP40Q08285 PRM4YPL156C 855 nt2.53□□□□□ -2
RRP40Q08285 MTL1YGR023W 1656 nt2.53□□□□□ -2
RRP40Q08285 CAF120YNL278W 3183 nt2.53□□□□□ -2.01
RRP40Q08285 YCG1YDR325W 3108 nt2.53□□□□□ -2.01
RRP40Q08285 HFM1YGL251C 3564 nt2.53□□□□□ -2.01
RRP40Q08285 AYT1YLL063C 1425 nt2.52□□□□□ -2.01
RRP40Q08285 EXO84YBR102C 2262 nt2.52□□□□□ -2.01
RRP40Q08285 AXL1YPR122W 3627 nt2.52□□□□□ -2.01
RRP40Q08285 HBT1YDL223C 3141 nt2.52□□□□□ -2.01
RRP40Q08285 YCR045W-AYCR045W-A 351 nt2.52□□□□□ -2.01
RRP40Q08285 AIM6YDL237W 1173 nt2.52□□□□□ -2.01
RRP40Q08285 SMX2YFL017W-A 234 nt2.52□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms