Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS1Q01581 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS1Q01581 EDA-201ENST00000338901 1233 ntBASIC20.3■□□□□ 0.84
HMGCS1Q01581 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS1Q01581 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
HMGCS1Q01581 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.3■□□□□ 0.84
HMGCS1Q01581 AF213884.3-201ENST00000563833 479 ntBASIC20.3■□□□□ 0.84
HMGCS1Q01581 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.3■□□□□ 0.84
HMGCS1Q01581 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HMGCS1Q01581 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS1Q01581 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS1Q01581 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS1Q01581 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS1Q01581 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
HMGCS1Q01581 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGCS1Q01581 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCS1Q01581 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGCS1Q01581 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCS1Q01581 AL049796.1-201ENST00000565336 1766 ntBASIC20.29■□□□□ 0.84
HMGCS1Q01581 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCS1Q01581 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGCS1Q01581 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.29■□□□□ 0.84
HMGCS1Q01581 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.29■□□□□ 0.84
HMGCS1Q01581 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGCS1Q01581 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.29■□□□□ 0.84
HMGCS1Q01581 AL355001.2-201ENST00000620617 1191 ntBASIC20.29■□□□□ 0.84
HMGCS1Q01581 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCS1Q01581 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCS1Q01581 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCS1Q01581 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCS1Q01581 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCS1Q01581 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMGCS1Q01581 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCS1Q01581 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCS1Q01581 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HMGCS1Q01581 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCS1Q01581 MIR939-201ENST00000401314 82 ntBASIC20.28■□□□□ 0.84
HMGCS1Q01581 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.28■□□□□ 0.84
HMGCS1Q01581 AC055733.4-201ENST00000638462 1354 ntBASIC20.28■□□□□ 0.84
HMGCS1Q01581 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
HMGCS1Q01581 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCS1Q01581 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
HMGCS1Q01581 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCS1Q01581 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
HMGCS1Q01581 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCS1Q01581 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.28■□□□□ 0.84
HMGCS1Q01581 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGCS1Q01581 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.27■□□□□ 0.84
HMGCS1Q01581 AC009237.3-201ENST00000393279 1427 ntBASIC20.27■□□□□ 0.84
HMGCS1Q01581 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
HMGCS1Q01581 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGCS1Q01581 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGCS1Q01581 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HMGCS1Q01581 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.27■□□□□ 0.84
HMGCS1Q01581 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HMGCS1Q01581 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.27■□□□□ 0.84
HMGCS1Q01581 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMGCS1Q01581 MIR638-201ENST00000385237 100 ntBASIC20.27■□□□□ 0.84
HMGCS1Q01581 AL031432.3-201ENST00000607698 485 ntBASIC20.27■□□□□ 0.84
HMGCS1Q01581 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.27■□□□□ 0.84
HMGCS1Q01581 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGCS1Q01581 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HMGCS1Q01581 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HMGCS1Q01581 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
HMGCS1Q01581 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
HMGCS1Q01581 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HMGCS1Q01581 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HMGCS1Q01581 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HMGCS1Q01581 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCS1Q01581 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.26■□□□□ 0.83
HMGCS1Q01581 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCS1Q01581 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.26■□□□□ 0.83
HMGCS1Q01581 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCS1Q01581 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCS1Q01581 RASA4CP-201ENST00000424092 1398 ntBASIC20.26■□□□□ 0.83
HMGCS1Q01581 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.26■□□□□ 0.83
HMGCS1Q01581 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HMGCS1Q01581 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.26■□□□□ 0.83
HMGCS1Q01581 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.26■□□□□ 0.83
HMGCS1Q01581 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCS1Q01581 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCS1Q01581 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCS1Q01581 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCS1Q01581 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.26■□□□□ 0.83
HMGCS1Q01581 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.26■□□□□ 0.83
HMGCS1Q01581 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCS1Q01581 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.26■□□□□ 0.83
HMGCS1Q01581 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.26■□□□□ 0.83
HMGCS1Q01581 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGCS1Q01581 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCS1Q01581 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.25■□□□□ 0.83
HMGCS1Q01581 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCS1Q01581 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCS1Q01581 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCS1Q01581 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.25■□□□□ 0.83
HMGCS1Q01581 AL136967.2-201ENST00000623968 743 ntBASIC20.25■□□□□ 0.83
HMGCS1Q01581 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCS1Q01581 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGCS1Q01581 AL157384.1-201ENST00000445995 2473 ntBASIC20.25■□□□□ 0.83
HMGCS1Q01581 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms