Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
NKX6-1P78426 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX6-1P78426 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.49■□□□□ 0.55
NKX6-1P78426 AC083906.2-201ENST00000511578 360 ntBASIC18.49■□□□□ 0.55
NKX6-1P78426 AC142086.2-201ENST00000569753 217 ntBASIC18.49■□□□□ 0.55
NKX6-1P78426 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NKX6-1P78426 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX6-1P78426 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX6-1P78426 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX6-1P78426 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX6-1P78426 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX6-1P78426 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX6-1P78426 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX6-1P78426 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.48■□□□□ 0.55
NKX6-1P78426 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX6-1P78426 AC055733.4-201ENST00000638462 1354 ntBASIC18.48■□□□□ 0.55
NKX6-1P78426 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NKX6-1P78426 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX6-1P78426 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
NKX6-1P78426 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX6-1P78426 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.48■□□□□ 0.55
NKX6-1P78426 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX6-1P78426 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.48■□□□□ 0.55
NKX6-1P78426 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.48■□□□□ 0.55
NKX6-1P78426 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
NKX6-1P78426 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.48■□□□□ 0.55
NKX6-1P78426 KRT18P6-201ENST00000555540 1265 ntBASIC18.48■□□□□ 0.55
NKX6-1P78426 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NKX6-1P78426 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NKX6-1P78426 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX6-1P78426 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NKX6-1P78426 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX6-1P78426 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX6-1P78426 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX6-1P78426 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NKX6-1P78426 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NKX6-1P78426 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.48■□□□□ 0.55
NKX6-1P78426 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NKX6-1P78426 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-1P78426 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.47■□□□□ 0.55
NKX6-1P78426 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-1P78426 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NKX6-1P78426 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.47■□□□□ 0.55
NKX6-1P78426 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-1P78426 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-1P78426 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-1P78426 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-1P78426 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-1P78426 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.47■□□□□ 0.55
NKX6-1P78426 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.47■□□□□ 0.55
NKX6-1P78426 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-1P78426 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.47■□□□□ 0.55
NKX6-1P78426 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.47■□□□□ 0.55
NKX6-1P78426 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-1P78426 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-1P78426 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-1P78426 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-1P78426 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.47■□□□□ 0.55
NKX6-1P78426 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-1P78426 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-1P78426 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-1P78426 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.46■□□□□ 0.55
NKX6-1P78426 AC080038.3-201ENST00000623346 1952 ntBASIC18.46■□□□□ 0.55
NKX6-1P78426 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-1P78426 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-1P78426 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NKX6-1P78426 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NKX6-1P78426 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.46■□□□□ 0.55
NKX6-1P78426 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-1P78426 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NKX6-1P78426 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.46■□□□□ 0.55
NKX6-1P78426 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-1P78426 AL117328.2-201ENST00000624617 1940 ntBASIC18.46■□□□□ 0.55
NKX6-1P78426 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.46■□□□□ 0.55
NKX6-1P78426 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NKX6-1P78426 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.46■□□□□ 0.55
NKX6-1P78426 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.46■□□□□ 0.55
NKX6-1P78426 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-1P78426 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-1P78426 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-1P78426 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.46■□□□□ 0.55
NKX6-1P78426 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-1P78426 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-1P78426 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.46■□□□□ 0.54
NKX6-1P78426 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX6-1P78426 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NKX6-1P78426 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX6-1P78426 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NKX6-1P78426 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.45■□□□□ 0.54
NKX6-1P78426 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NKX6-1P78426 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NKX6-1P78426 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NKX6-1P78426 TSPY6P-201ENST00000448518 926 ntBASIC18.45■□□□□ 0.54
NKX6-1P78426 AC231657.2-201ENST00000624556 255 ntBASIC18.45■□□□□ 0.54
NKX6-1P78426 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX6-1P78426 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.45■□□□□ 0.54
NKX6-1P78426 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX6-1P78426 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX6-1P78426 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.45■□□□□ 0.54
NKX6-1P78426 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms