Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEC61A1P61619 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEC61A1P61619 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.33■□□□□ 0.53
SEC61A1P61619 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
SEC61A1P61619 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEC61A1P61619 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SEC61A1P61619 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SEC61A1P61619 IGHV3-19-201ENST00000521488 291 ntBASIC18.33■□□□□ 0.52
SEC61A1P61619 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.33■□□□□ 0.52
SEC61A1P61619 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SEC61A1P61619 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
SEC61A1P61619 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SEC61A1P61619 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
SEC61A1P61619 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SEC61A1P61619 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SEC61A1P61619 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SEC61A1P61619 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.33■□□□□ 0.52
SEC61A1P61619 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SEC61A1P61619 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.33■□□□□ 0.52
SEC61A1P61619 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SEC61A1P61619 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SEC61A1P61619 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A1P61619 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SEC61A1P61619 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A1P61619 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SEC61A1P61619 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SEC61A1P61619 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
SEC61A1P61619 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.32■□□□□ 0.52
SEC61A1P61619 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SEC61A1P61619 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SEC61A1P61619 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SEC61A1P61619 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A1P61619 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SEC61A1P61619 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A1P61619 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SEC61A1P61619 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SEC61A1P61619 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SEC61A1P61619 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A1P61619 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.31■□□□□ 0.52
SEC61A1P61619 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SEC61A1P61619 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.31■□□□□ 0.52
SEC61A1P61619 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SEC61A1P61619 LINC01960-201ENST00000563759 1884 ntBASIC18.31■□□□□ 0.52
SEC61A1P61619 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.31■□□□□ 0.52
SEC61A1P61619 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A1P61619 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A1P61619 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SEC61A1P61619 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SEC61A1P61619 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A1P61619 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SEC61A1P61619 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.31■□□□□ 0.52
SEC61A1P61619 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.31■□□□□ 0.52
SEC61A1P61619 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SEC61A1P61619 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.31■□□□□ 0.52
SEC61A1P61619 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A1P61619 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A1P61619 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SEC61A1P61619 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A1P61619 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A1P61619 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.3■□□□□ 0.52
SEC61A1P61619 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A1P61619 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A1P61619 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.3■□□□□ 0.52
SEC61A1P61619 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A1P61619 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
SEC61A1P61619 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A1P61619 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A1P61619 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
SEC61A1P61619 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A1P61619 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A1P61619 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SEC61A1P61619 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A1P61619 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
SEC61A1P61619 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A1P61619 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A1P61619 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SEC61A1P61619 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.29■□□□□ 0.52
SEC61A1P61619 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A1P61619 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A1P61619 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A1P61619 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.29■□□□□ 0.52
SEC61A1P61619 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.29■□□□□ 0.52
SEC61A1P61619 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.29■□□□□ 0.52
SEC61A1P61619 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A1P61619 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A1P61619 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SEC61A1P61619 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SEC61A1P61619 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A1P61619 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A1P61619 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.28■□□□□ 0.52
SEC61A1P61619 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.28■□□□□ 0.52
SEC61A1P61619 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.28■□□□□ 0.52
SEC61A1P61619 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.28■□□□□ 0.52
SEC61A1P61619 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A1P61619 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.28■□□□□ 0.52
SEC61A1P61619 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SEC61A1P61619 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SEC61A1P61619 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A1P61619 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.28■□□□□ 0.52
SEC61A1P61619 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms