Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
PER3P56645 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PER3P56645 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PER3P56645 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PER3P56645 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PER3P56645 ECEL1P1-201ENST00000373592 1742 ntBASIC19.42■□□□□ 0.7
PER3P56645 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.42■□□□□ 0.7
PER3P56645 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PER3P56645 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.41■□□□□ 0.7
PER3P56645 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PER3P56645 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PER3P56645 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PER3P56645 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.41■□□□□ 0.7
PER3P56645 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PER3P56645 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.41■□□□□ 0.7
PER3P56645 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.41■□□□□ 0.7
PER3P56645 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.41■□□□□ 0.7
PER3P56645 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PER3P56645 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PER3P56645 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PER3P56645 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PER3P56645 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.41■□□□□ 0.7
PER3P56645 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PER3P56645 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.4■□□□□ 0.7
PER3P56645 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PER3P56645 AC092068.2-201ENST00000590491 1708 ntBASIC19.4■□□□□ 0.7
PER3P56645 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PER3P56645 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PER3P56645 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PER3P56645 SMUG1P1-201ENST00000590640 811 ntBASIC19.4■□□□□ 0.7
PER3P56645 AC005181.1-201ENST00000604782 1256 ntBASIC19.4■□□□□ 0.7
PER3P56645 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.4■□□□□ 0.7
PER3P56645 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.4■□□□□ 0.7
PER3P56645 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PER3P56645 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PER3P56645 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PER3P56645 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PER3P56645 OXCT2P1-201ENST00000447263 1535 ntBASIC19.4■□□□□ 0.7
PER3P56645 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.4■□□□□ 0.7
PER3P56645 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PER3P56645 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PER3P56645 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.39■□□□□ 0.69
PER3P56645 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.39■□□□□ 0.69
PER3P56645 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PER3P56645 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.39■□□□□ 0.69
PER3P56645 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.39■□□□□ 0.69
PER3P56645 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PER3P56645 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PER3P56645 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PER3P56645 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.39■□□□□ 0.69
PER3P56645 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PER3P56645 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PER3P56645 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PER3P56645 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PER3P56645 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.39■□□□□ 0.69
PER3P56645 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PER3P56645 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PER3P56645 AC092667.1-201ENST00000434301 2586 ntBASIC19.39■□□□□ 0.69
PER3P56645 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PER3P56645 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PER3P56645 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PER3P56645 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PER3P56645 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PER3P56645 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PER3P56645 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PER3P56645 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.38■□□□□ 0.69
PER3P56645 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.38■□□□□ 0.69
PER3P56645 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PER3P56645 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PER3P56645 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.38■□□□□ 0.69
PER3P56645 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PER3P56645 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PER3P56645 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PER3P56645 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.37■□□□□ 0.69
PER3P56645 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.37■□□□□ 0.69
PER3P56645 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.37■□□□□ 0.69
PER3P56645 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.37■□□□□ 0.69
PER3P56645 AC133041.1-202ENST00000642053 222 ntBASIC19.37■□□□□ 0.69
PER3P56645 AC073130.3-201ENST00000624389 2278 ntBASIC19.37■□□□□ 0.69
PER3P56645 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PER3P56645 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PER3P56645 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PER3P56645 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PER3P56645 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PER3P56645 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PER3P56645 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms