Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 FMP46YKR049C 402 nt4.97□□□□□ -1.61
UFD2P54860 YOR082CYOR082C 342 nt4.97□□□□□ -1.61
UFD2P54860 YPL185WYPL185W 396 nt4.97□□□□□ -1.61
UFD2P54860 YAR1YPL239W 603 nt4.97□□□□□ -1.61
UFD2P54860 PHO88YBR106W 567 nt4.97□□□□□ -1.61
UFD2P54860 PRP43YGL120C 2304 nt4.97□□□□□ -1.61
UFD2P54860 TOS3YGL179C 1683 nt4.96□□□□□ -1.61
UFD2P54860 GCR1YPL075W 2358 nt4.96□□□□□ -1.62
UFD2P54860 BMH2YDR099W 822 nt4.96□□□□□ -1.62
UFD2P54860 YEL045CYEL045C 426 nt4.96□□□□□ -1.62
UFD2P54860 YIR020C-BYIR020C-B 735 nt4.96□□□□□ -1.62
UFD2P54860 YKL069WYKL069W 543 nt4.96□□□□□ -1.62
UFD2P54860 RAD33YML011C 534 nt4.96□□□□□ -1.62
UFD2P54860 CTK3YML112W 891 nt4.96□□□□□ -1.62
UFD2P54860 YOR203WYOR203W 354 nt4.96□□□□□ -1.62
UFD2P54860 MSS18YPR134W 807 nt4.96□□□□□ -1.62
UFD2P54860 15S_rRNA15S_rRNA 1649 nt4.96□□□□□ -1.62
UFD2P54860 PCA1YBR295W 3651 nt4.96□□□□□ -1.62
UFD2P54860 SLD5YDR489W 885 nt4.95□□□□□ -1.62
UFD2P54860 YFR010W-AYFR010W-A 189 nt4.95□□□□□ -1.62
UFD2P54860 MRM2YGL136C 963 nt4.95□□□□□ -1.62
UFD2P54860 RTT102YGR275W 474 nt4.95□□□□□ -1.62
UFD2P54860 YKL044WYKL044W 321 nt4.95□□□□□ -1.62
UFD2P54860 RIM11YMR139W 1113 nt4.95□□□□□ -1.62
UFD2P54860 FMP23YBR047W 528 nt4.95□□□□□ -1.62
UFD2P54860 YPL107WYPL107W 747 nt4.95□□□□□ -1.62
UFD2P54860 CMD1YBR109C 444 nt4.95□□□□□ -1.62
UFD2P54860 ARC40YBR234C 1155 nt4.95□□□□□ -1.62
UFD2P54860 GLN4YOR168W 2430 nt4.95□□□□□ -1.62
UFD2P54860 TPO2YGR138C 1845 nt4.95□□□□□ -1.62
UFD2P54860 DAS1YJL149W 1992 nt4.95□□□□□ -1.62
UFD2P54860 RRP42YDL111C 798 nt4.94□□□□□ -1.62
UFD2P54860 YJL127C-BYJL127C-B 159 nt4.94□□□□□ -1.62
UFD2P54860 AIM29YKR074W 468 nt4.94□□□□□ -1.62
UFD2P54860 YLR101CYLR101C 396 nt4.94□□□□□ -1.62
UFD2P54860 VPS63YLR261C 327 nt4.94□□□□□ -1.62
UFD2P54860 TIF11YMR260C 462 nt4.94□□□□□ -1.62
UFD2P54860 TPK2YPL203W 1143 nt4.94□□□□□ -1.62
UFD2P54860 PRP3YDR473C 1410 nt4.94□□□□□ -1.62
UFD2P54860 RPN3YER021W 1572 nt4.94□□□□□ -1.62
UFD2P54860 SEC2YNL272C 2280 nt4.94□□□□□ -1.62
UFD2P54860 SIP1YDR422C 2448 nt4.94□□□□□ -1.62
UFD2P54860 PPN1YDR452W 2025 nt4.94□□□□□ -1.62
UFD2P54860 ADY4YLR227C 1482 nt4.94□□□□□ -1.62
UFD2P54860 YKR078WYKR078W 1758 nt4.93□□□□□ -1.62
UFD2P54860 ELO2YCR034W 1044 nt4.93□□□□□ -1.62
UFD2P54860 snR7-SsnR7-S 179 nt4.93□□□□□ -1.62
UFD2P54860 API2YDR525W 330 nt4.93□□□□□ -1.62
UFD2P54860 SPO73YER046W 432 nt4.93□□□□□ -1.62
UFD2P54860 tK(CUU)CtK(CUU)C 73 nt4.93□□□□□ -1.62
UFD2P54860 tK(CUU)D1tK(CUU)D1 73 nt4.93□□□□□ -1.62
UFD2P54860 tK(CUU)D2tK(CUU)D2 73 nt4.93□□□□□ -1.62
UFD2P54860 tK(CUU)E1tK(CUU)E1 73 nt4.93□□□□□ -1.62
UFD2P54860 tK(CUU)E2tK(CUU)E2 73 nt4.93□□□□□ -1.62
UFD2P54860 tK(CUU)FtK(CUU)F 73 nt4.93□□□□□ -1.62
UFD2P54860 tK(CUU)G1tK(CUU)G1 73 nt4.93□□□□□ -1.62
UFD2P54860 tK(CUU)G2tK(CUU)G2 73 nt4.93□□□□□ -1.62
UFD2P54860 tK(CUU)G3tK(CUU)G3 73 nt4.93□□□□□ -1.62
UFD2P54860 tK(CUU)ItK(CUU)I 73 nt4.93□□□□□ -1.62
UFD2P54860 tK(CUU)JtK(CUU)J 73 nt4.93□□□□□ -1.62
UFD2P54860 tK(CUU)KtK(CUU)K 73 nt4.93□□□□□ -1.62
UFD2P54860 tK(CUU)MtK(CUU)M 73 nt4.93□□□□□ -1.62
UFD2P54860 tK(CUU)PtK(CUU)P 73 nt4.93□□□□□ -1.62
UFD2P54860 PTR3YFR029W 2037 nt4.93□□□□□ -1.62
UFD2P54860 YGL108CYGL108C 423 nt4.93□□□□□ -1.62
UFD2P54860 MTM1YGR257C 1101 nt4.93□□□□□ -1.62
UFD2P54860 DPH1YIL103W 1278 nt4.93□□□□□ -1.62
UFD2P54860 NNK1YKL171W 2787 nt4.93□□□□□ -1.62
UFD2P54860 KTR2YKR061W 1278 nt4.93□□□□□ -1.62
UFD2P54860 YLR224WYLR224W 1110 nt4.93□□□□□ -1.62
UFD2P54860 YBR076C-AYBR076C-A 267 nt4.93□□□□□ -1.62
UFD2P54860 FLC1YPL221W 2382 nt4.93□□□□□ -1.62
UFD2P54860 EXO5YBR163W 1758 nt4.93□□□□□ -1.62
UFD2P54860 KAP114YGL241W 3015 nt4.92□□□□□ -1.62
UFD2P54860 PER1YCR044C 1074 nt4.92□□□□□ -1.62
UFD2P54860 YER068C-AYER068C-A 432 nt4.92□□□□□ -1.62
UFD2P54860 YER135CYER135C 393 nt4.92□□□□□ -1.62
UFD2P54860 ENT3YJR125C 1227 nt4.92□□□□□ -1.62
UFD2P54860 GRE2YOL151W 1029 nt4.92□□□□□ -1.62
UFD2P54860 YPR197CYPR197C 564 nt4.92□□□□□ -1.62
UFD2P54860 YCL021W-AYCL021W-A 378 nt4.92□□□□□ -1.62
UFD2P54860 snR54snR54 86 nt4.92□□□□□ -1.62
UFD2P54860 MDR1YGR100W 2853 nt4.92□□□□□ -1.62
UFD2P54860 ASK10YGR097W 3441 nt4.92□□□□□ -1.62
UFD2P54860 HNT1YDL125C 477 nt4.91□□□□□ -1.62
UFD2P54860 AIM7YDR063W 450 nt4.91□□□□□ -1.62
UFD2P54860 SWF1YDR126W 1011 nt4.91□□□□□ -1.62
UFD2P54860 tL(UAG)JtL(UAG)J 82 nt4.91□□□□□ -1.62
UFD2P54860 tL(UAG)L1tL(UAG)L1 82 nt4.91□□□□□ -1.62
UFD2P54860 tL(UAG)L2tL(UAG)L2 82 nt4.91□□□□□ -1.62
UFD2P54860 AML1YGR001C 747 nt4.91□□□□□ -1.62
UFD2P54860 RPS20YHL015W 366 nt4.91□□□□□ -1.62
UFD2P54860 VMA10YHR039C-A 345 nt4.91□□□□□ -1.62
UFD2P54860 DAD2YKR083C 402 nt4.91□□□□□ -1.62
UFD2P54860 AFB1YLR040C 675 nt4.91□□□□□ -1.62
UFD2P54860 SWM2YNR004W 441 nt4.91□□□□□ -1.62
UFD2P54860 DIT2YDR402C 1470 nt4.91□□□□□ -1.62
UFD2P54860 GPR1YDL035C 2886 nt4.91□□□□□ -1.62
UFD2P54860 FAA3YIL009W 2085 nt4.9□□□□□ -1.62
UFD2P54860 YER046W-AYER046W-A 330 nt4.9□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms