Protein–RNA interactions for Protein: P54108

CRISP3, Cysteine-rich secretory protein 3, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3P54108 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CRISP3P54108 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CRISP3P54108 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CRISP3P54108 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CRISP3P54108 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CRISP3P54108 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRISP3P54108 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRISP3P54108 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRISP3P54108 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRISP3P54108 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.7■□□□□ 0.74
CRISP3P54108 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CRISP3P54108 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRISP3P54108 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.7■□□□□ 0.74
CRISP3P54108 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRISP3P54108 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.7■□□□□ 0.74
CRISP3P54108 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRISP3P54108 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
CRISP3P54108 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.7■□□□□ 0.74
CRISP3P54108 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.7■□□□□ 0.74
CRISP3P54108 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CRISP3P54108 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRISP3P54108 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRISP3P54108 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CRISP3P54108 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRISP3P54108 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CRISP3P54108 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRISP3P54108 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
CRISP3P54108 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRISP3P54108 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRISP3P54108 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CRISP3P54108 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
CRISP3P54108 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
CRISP3P54108 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRISP3P54108 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.69■□□□□ 0.74
CRISP3P54108 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRISP3P54108 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CRISP3P54108 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRISP3P54108 AL157384.1-201ENST00000445995 2473 ntBASIC19.69■□□□□ 0.74
CRISP3P54108 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRISP3P54108 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRISP3P54108 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CRISP3P54108 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CRISP3P54108 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRISP3P54108 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CRISP3P54108 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CRISP3P54108 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CRISP3P54108 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CRISP3P54108 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.68■□□□□ 0.74
CRISP3P54108 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.68■□□□□ 0.74
CRISP3P54108 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.68■□□□□ 0.74
CRISP3P54108 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CRISP3P54108 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CRISP3P54108 AC096631.2-201ENST00000436136 790 ntBASIC19.68■□□□□ 0.74
CRISP3P54108 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.68■□□□□ 0.74
CRISP3P54108 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CRISP3P54108 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.68■□□□□ 0.74
CRISP3P54108 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.68■□□□□ 0.74
CRISP3P54108 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.68■□□□□ 0.74
CRISP3P54108 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CRISP3P54108 AC027682.1-201ENST00000562846 899 ntBASIC19.68■□□□□ 0.74
CRISP3P54108 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.68■□□□□ 0.74
CRISP3P54108 AC008764.7-201ENST00000593779 1081 ntBASIC19.68■□□□□ 0.74
CRISP3P54108 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.68■□□□□ 0.74
CRISP3P54108 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.68■□□□□ 0.74
CRISP3P54108 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CRISP3P54108 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CRISP3P54108 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CRISP3P54108 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CRISP3P54108 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CRISP3P54108 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.68■□□□□ 0.74
CRISP3P54108 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CRISP3P54108 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.68■□□□□ 0.74
CRISP3P54108 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CRISP3P54108 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CRISP3P54108 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CRISP3P54108 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.67■□□□□ 0.74
CRISP3P54108 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CRISP3P54108 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CRISP3P54108 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CRISP3P54108 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
CRISP3P54108 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CRISP3P54108 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
CRISP3P54108 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.67■□□□□ 0.74
CRISP3P54108 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CRISP3P54108 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.67■□□□□ 0.74
CRISP3P54108 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CRISP3P54108 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.67■□□□□ 0.74
CRISP3P54108 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.67■□□□□ 0.74
CRISP3P54108 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.67■□□□□ 0.74
CRISP3P54108 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CRISP3P54108 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CRISP3P54108 AC009237.3-201ENST00000393279 1427 ntBASIC19.67■□□□□ 0.74
CRISP3P54108 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CRISP3P54108 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CRISP3P54108 AC099791.1-201ENST00000416440 715 ntBASIC19.66■□□□□ 0.74
CRISP3P54108 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.66■□□□□ 0.74
CRISP3P54108 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.66■□□□□ 0.74
CRISP3P54108 PBX2P1-201ENST00000493219 1291 ntBASIC19.66■□□□□ 0.74
CRISP3P54108 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CRISP3P54108 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms