Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGA2P52926 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGA2P52926 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGA2P52926 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGA2P52926 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGA2P52926 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.27■□□□□ 0.68
HMGA2P52926 SYT6-210ENST00000641643 1587 ntBASIC19.27■□□□□ 0.68
HMGA2P52926 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGA2P52926 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.27■□□□□ 0.68
HMGA2P52926 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.27■□□□□ 0.68
HMGA2P52926 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGA2P52926 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGA2P52926 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
HMGA2P52926 SLC47A1P1-202ENST00000449666 945 ntBASIC19.27■□□□□ 0.68
HMGA2P52926 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGA2P52926 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.27■□□□□ 0.68
HMGA2P52926 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGA2P52926 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.27■□□□□ 0.67
HMGA2P52926 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.27■□□□□ 0.67
HMGA2P52926 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMGA2P52926 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HMGA2P52926 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMGA2P52926 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMGA2P52926 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.26■□□□□ 0.67
HMGA2P52926 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HMGA2P52926 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HMGA2P52926 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGA2P52926 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HMGA2P52926 GUSBP5-201ENST00000418136 578 ntBASIC19.26■□□□□ 0.67
HMGA2P52926 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
HMGA2P52926 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.26■□□□□ 0.67
HMGA2P52926 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.26■□□□□ 0.67
HMGA2P52926 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.26■□□□□ 0.67
HMGA2P52926 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGA2P52926 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HMGA2P52926 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGA2P52926 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMGA2P52926 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.25■□□□□ 0.67
HMGA2P52926 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HMGA2P52926 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGA2P52926 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HMGA2P52926 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGA2P52926 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGA2P52926 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGA2P52926 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HMGA2P52926 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.25■□□□□ 0.67
HMGA2P52926 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMGA2P52926 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGA2P52926 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGA2P52926 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMGA2P52926 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGA2P52926 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMGA2P52926 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.25■□□□□ 0.67
HMGA2P52926 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGA2P52926 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HMGA2P52926 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGA2P52926 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMGA2P52926 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HMGA2P52926 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGA2P52926 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
HMGA2P52926 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGA2P52926 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGA2P52926 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMGA2P52926 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGA2P52926 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGA2P52926 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.24■□□□□ 0.67
HMGA2P52926 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGA2P52926 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGA2P52926 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGA2P52926 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.24■□□□□ 0.67
HMGA2P52926 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.24■□□□□ 0.67
HMGA2P52926 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.24■□□□□ 0.67
HMGA2P52926 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMGA2P52926 SMUG1P1-201ENST00000590640 811 ntBASIC19.24■□□□□ 0.67
HMGA2P52926 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.24■□□□□ 0.67
HMGA2P52926 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.24■□□□□ 0.67
HMGA2P52926 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
HMGA2P52926 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGA2P52926 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGA2P52926 AC121338.2-201ENST00000622535 1744 ntBASIC19.23■□□□□ 0.67
HMGA2P52926 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGA2P52926 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGA2P52926 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGA2P52926 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
HMGA2P52926 AL035685.1-201ENST00000636663 812 ntBASIC19.23■□□□□ 0.67
HMGA2P52926 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGA2P52926 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGA2P52926 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGA2P52926 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGA2P52926 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.22■□□□□ 0.67
HMGA2P52926 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.22■□□□□ 0.67
HMGA2P52926 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HMGA2P52926 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGA2P52926 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGA2P52926 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGA2P52926 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HMGA2P52926 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGA2P52926 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGA2P52926 AC133561.4-201ENST00000566112 224 ntBASIC19.22■□□□□ 0.67
HMGA2P52926 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms