Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDR1P51861 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.94■■□□□ 1.26
CDR1P51861 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.94■■□□□ 1.26
CDR1P51861 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CDR1P51861 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDR1P51861 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDR1P51861 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.93■■□□□ 1.26
CDR1P51861 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CDR1P51861 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
CDR1P51861 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
CDR1P51861 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDR1P51861 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.93■■□□□ 1.26
CDR1P51861 AC079089.2-201ENST00000531211 1277 ntBASIC22.93■■□□□ 1.26
CDR1P51861 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.93■■□□□ 1.26
CDR1P51861 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.93■■□□□ 1.26
CDR1P51861 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.93■■□□□ 1.26
CDR1P51861 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.93■■□□□ 1.26
CDR1P51861 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.93■■□□□ 1.26
CDR1P51861 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.93■■□□□ 1.26
CDR1P51861 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDR1P51861 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CDR1P51861 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDR1P51861 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CDR1P51861 AP004607.4-201ENST00000530158 1459 ntBASIC22.92■■□□□ 1.26
CDR1P51861 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDR1P51861 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.92■■□□□ 1.26
CDR1P51861 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CDR1P51861 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CDR1P51861 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.92■■□□□ 1.26
CDR1P51861 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
CDR1P51861 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDR1P51861 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
CDR1P51861 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDR1P51861 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDR1P51861 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
CDR1P51861 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CDR1P51861 AC080038.3-201ENST00000623346 1952 ntBASIC22.91■■□□□ 1.26
CDR1P51861 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDR1P51861 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.91■■□□□ 1.26
CDR1P51861 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CDR1P51861 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDR1P51861 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CDR1P51861 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.9■■□□□ 1.26
CDR1P51861 AP004607.7-201ENST00000527152 1677 ntBASIC22.9■■□□□ 1.26
CDR1P51861 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
CDR1P51861 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDR1P51861 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
CDR1P51861 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.9■■□□□ 1.26
CDR1P51861 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CDR1P51861 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
CDR1P51861 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDR1P51861 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.9■■□□□ 1.26
CDR1P51861 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.9■■□□□ 1.26
CDR1P51861 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CDR1P51861 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.26
CDR1P51861 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.89■■□□□ 1.26
CDR1P51861 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
CDR1P51861 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CDR1P51861 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CDR1P51861 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CDR1P51861 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
CDR1P51861 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.89■■□□□ 1.25
CDR1P51861 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.89■■□□□ 1.25
CDR1P51861 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.89■■□□□ 1.25
CDR1P51861 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.89■■□□□ 1.25
CDR1P51861 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CDR1P51861 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDR1P51861 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDR1P51861 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.88■■□□□ 1.25
CDR1P51861 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
CDR1P51861 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.88■■□□□ 1.25
CDR1P51861 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.88■■□□□ 1.25
CDR1P51861 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.88■■□□□ 1.25
CDR1P51861 AC090192.1-201ENST00000517740 490 ntBASIC22.88■■□□□ 1.25
CDR1P51861 AL121603.2-201ENST00000557373 2117 ntBASIC22.88■■□□□ 1.25
CDR1P51861 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.88■■□□□ 1.25
CDR1P51861 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.88■■□□□ 1.25
CDR1P51861 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 AC005224.4-201ENST00000583262 1652 ntBASIC22.87■■□□□ 1.25
CDR1P51861 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.87■■□□□ 1.25
CDR1P51861 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 AC139530.1-201ENST00000575312 1977 ntBASIC22.87■■□□□ 1.25
CDR1P51861 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.87■■□□□ 1.25
CDR1P51861 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
CDR1P51861 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CDR1P51861 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.87■■□□□ 1.25
CDR1P51861 OR7E47P-201ENST00000546390 1422 ntBASIC22.87■■□□□ 1.25
CDR1P51861 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDR1P51861 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms