Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN4P51793 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN4P51793 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN4P51793 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN4P51793 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.3■■□□□ 1.16
CLCN4P51793 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCN4P51793 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN4P51793 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.29■■□□□ 1.16
CLCN4P51793 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN4P51793 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN4P51793 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.29■■□□□ 1.16
CLCN4P51793 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CLCN4P51793 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.29■■□□□ 1.16
CLCN4P51793 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.29■■□□□ 1.16
CLCN4P51793 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN4P51793 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.29■■□□□ 1.16
CLCN4P51793 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN4P51793 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN4P51793 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLCN4P51793 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCN4P51793 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.28■■□□□ 1.16
CLCN4P51793 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.28■■□□□ 1.16
CLCN4P51793 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.28■■□□□ 1.16
CLCN4P51793 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.28■■□□□ 1.16
CLCN4P51793 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.28■■□□□ 1.16
CLCN4P51793 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLCN4P51793 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCN4P51793 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCN4P51793 AC061975.6-201ENST00000579045 1553 ntBASIC22.28■■□□□ 1.16
CLCN4P51793 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCN4P51793 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCN4P51793 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN4P51793 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
CLCN4P51793 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.27■■□□□ 1.16
CLCN4P51793 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CLCN4P51793 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN4P51793 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN4P51793 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN4P51793 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN4P51793 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CLCN4P51793 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.27■■□□□ 1.16
CLCN4P51793 AC098590.1-201ENST00000468126 897 ntBASIC22.27■■□□□ 1.16
CLCN4P51793 RPS2P52-201ENST00000469610 820 ntBASIC22.27■■□□□ 1.16
CLCN4P51793 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN4P51793 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLCN4P51793 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN4P51793 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.26■■□□□ 1.15
CLCN4P51793 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.26■■□□□ 1.15
CLCN4P51793 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN4P51793 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN4P51793 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN4P51793 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN4P51793 ESRRAP1-201ENST00000400596 1257 ntBASIC22.26■■□□□ 1.15
CLCN4P51793 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.26■■□□□ 1.15
CLCN4P51793 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.26■■□□□ 1.15
CLCN4P51793 DUSP5P2-201ENST00000426873 1033 ntBASIC22.26■■□□□ 1.15
CLCN4P51793 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN4P51793 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.26■■□□□ 1.15
CLCN4P51793 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.26■■□□□ 1.15
CLCN4P51793 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.26■■□□□ 1.15
CLCN4P51793 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN4P51793 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN4P51793 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLCN4P51793 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLCN4P51793 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCN4P51793 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.25■■□□□ 1.15
CLCN4P51793 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.25■■□□□ 1.15
CLCN4P51793 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.25■■□□□ 1.15
CLCN4P51793 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CLCN4P51793 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCN4P51793 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN4P51793 AC068473.5-201ENST00000616428 2072 ntBASIC22.24■■□□□ 1.15
CLCN4P51793 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN4P51793 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN4P51793 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN4P51793 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN4P51793 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.24■■□□□ 1.15
CLCN4P51793 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.24■■□□□ 1.15
CLCN4P51793 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN4P51793 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.24■■□□□ 1.15
CLCN4P51793 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN4P51793 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.24■■□□□ 1.15
CLCN4P51793 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN4P51793 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCN4P51793 AC012676.1-201ENST00000574705 1949 ntBASIC22.23■■□□□ 1.15
CLCN4P51793 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN4P51793 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.23■■□□□ 1.15
CLCN4P51793 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN4P51793 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN4P51793 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN4P51793 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CLCN4P51793 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CLCN4P51793 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.23■■□□□ 1.15
CLCN4P51793 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.23■■□□□ 1.15
CLCN4P51793 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.23■■□□□ 1.15
CLCN4P51793 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN4P51793 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLCN4P51793 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CLCN4P51793 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.23■■□□□ 1.15
CLCN4P51793 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms