Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN2P51788 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN2P51788 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CLCN2P51788 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CLCN2P51788 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.33■□□□□ 0.85
CLCN2P51788 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.33■□□□□ 0.85
CLCN2P51788 RARRES2P6-201ENST00000567333 442 ntBASIC20.33■□□□□ 0.85
CLCN2P51788 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.33■□□□□ 0.85
CLCN2P51788 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN2P51788 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN2P51788 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.33■□□□□ 0.84
CLCN2P51788 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN2P51788 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN2P51788 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN2P51788 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN2P51788 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCN2P51788 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CLCN2P51788 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLCN2P51788 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN2P51788 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCN2P51788 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN2P51788 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.32■□□□□ 0.84
CLCN2P51788 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN2P51788 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCN2P51788 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN2P51788 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.32■□□□□ 0.84
CLCN2P51788 AC010141.3-201ENST00000456659 717 ntBASIC20.32■□□□□ 0.84
CLCN2P51788 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.32■□□□□ 0.84
CLCN2P51788 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCN2P51788 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.32■□□□□ 0.84
CLCN2P51788 AL358852.1-201ENST00000623174 1268 ntBASIC20.32■□□□□ 0.84
CLCN2P51788 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN2P51788 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN2P51788 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.32■□□□□ 0.84
CLCN2P51788 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN2P51788 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCN2P51788 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN2P51788 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN2P51788 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN2P51788 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN2P51788 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
CLCN2P51788 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
CLCN2P51788 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN2P51788 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.31■□□□□ 0.84
CLCN2P51788 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.31■□□□□ 0.84
CLCN2P51788 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.31■□□□□ 0.84
CLCN2P51788 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.31■□□□□ 0.84
CLCN2P51788 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN2P51788 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
CLCN2P51788 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN2P51788 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CLCN2P51788 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN2P51788 AL391422.3-201ENST00000603791 2761 ntBASIC20.31■□□□□ 0.84
CLCN2P51788 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.31■□□□□ 0.84
CLCN2P51788 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN2P51788 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN2P51788 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN2P51788 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CLCN2P51788 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN2P51788 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.31■□□□□ 0.84
CLCN2P51788 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCN2P51788 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN2P51788 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN2P51788 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN2P51788 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCN2P51788 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN2P51788 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCN2P51788 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCN2P51788 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN2P51788 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN2P51788 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN2P51788 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.3■□□□□ 0.84
CLCN2P51788 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CLCN2P51788 AL354811.1-201ENST00000610286 706 ntBASIC20.3■□□□□ 0.84
CLCN2P51788 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CLCN2P51788 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN2P51788 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN2P51788 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN2P51788 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN2P51788 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
CLCN2P51788 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN2P51788 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.29■□□□□ 0.84
CLCN2P51788 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN2P51788 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN2P51788 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN2P51788 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN2P51788 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN2P51788 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.29■□□□□ 0.84
CLCN2P51788 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN2P51788 AC012414.1-201ENST00000556676 535 ntBASIC20.29■□□□□ 0.84
CLCN2P51788 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CLCN2P51788 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN2P51788 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.29■□□□□ 0.84
CLCN2P51788 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCN2P51788 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.29■□□□□ 0.84
CLCN2P51788 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN2P51788 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN2P51788 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN2P51788 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN2P51788 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms