Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HCFC1P51610 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HCFC1P51610 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HCFC1P51610 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.48■□□□□ 0.55
HCFC1P51610 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.48■□□□□ 0.55
HCFC1P51610 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.48■□□□□ 0.55
HCFC1P51610 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HCFC1P51610 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HCFC1P51610 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HCFC1P51610 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HCFC1P51610 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.48■□□□□ 0.55
HCFC1P51610 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HCFC1P51610 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1P51610 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1P51610 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1P51610 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1P51610 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1P51610 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HCFC1P51610 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.47■□□□□ 0.55
HCFC1P51610 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.47■□□□□ 0.55
HCFC1P51610 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.47■□□□□ 0.55
HCFC1P51610 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1P51610 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HCFC1P51610 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HCFC1P51610 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1P51610 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1P51610 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.47■□□□□ 0.55
HCFC1P51610 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.47■□□□□ 0.55
HCFC1P51610 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.47■□□□□ 0.55
HCFC1P51610 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.47■□□□□ 0.55
HCFC1P51610 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1P51610 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1P51610 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1P51610 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1P51610 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1P51610 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1P51610 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1P51610 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.46■□□□□ 0.55
HCFC1P51610 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1P51610 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.46■□□□□ 0.55
HCFC1P51610 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1P51610 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1P51610 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HCFC1P51610 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1P51610 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.46■□□□□ 0.55
HCFC1P51610 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1P51610 AL158047.1-201ENST00000445918 881 ntBASIC18.46■□□□□ 0.55
HCFC1P51610 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.46■□□□□ 0.55
HCFC1P51610 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.46■□□□□ 0.55
HCFC1P51610 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.46■□□□□ 0.55
HCFC1P51610 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.46■□□□□ 0.55
HCFC1P51610 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.46■□□□□ 0.55
HCFC1P51610 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.46■□□□□ 0.55
HCFC1P51610 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HCFC1P51610 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1P51610 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.46■□□□□ 0.55
HCFC1P51610 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1P51610 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HCFC1P51610 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.45■□□□□ 0.54
HCFC1P51610 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
HCFC1P51610 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.45■□□□□ 0.54
HCFC1P51610 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.45■□□□□ 0.54
HCFC1P51610 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.45■□□□□ 0.54
HCFC1P51610 AC006058.3-201ENST00000606217 1069 ntBASIC18.45■□□□□ 0.54
HCFC1P51610 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
HCFC1P51610 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1P51610 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1P51610 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1P51610 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.45■□□□□ 0.54
HCFC1P51610 AP003097.1-201ENST00000530657 1135 ntBASIC18.45■□□□□ 0.54
HCFC1P51610 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HCFC1P51610 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.45■□□□□ 0.54
HCFC1P51610 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.45■□□□□ 0.54
HCFC1P51610 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.45■□□□□ 0.54
HCFC1P51610 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1P51610 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1P51610 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HCFC1P51610 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1P51610 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.45■□□□□ 0.54
HCFC1P51610 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1P51610 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
HCFC1P51610 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
HCFC1P51610 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCFC1P51610 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCFC1P51610 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.44■□□□□ 0.54
HCFC1P51610 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HCFC1P51610 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HCFC1P51610 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.44■□□□□ 0.54
HCFC1P51610 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HCFC1P51610 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.44■□□□□ 0.54
HCFC1P51610 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCFC1P51610 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.44■□□□□ 0.54
HCFC1P51610 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HCFC1P51610 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.44■□□□□ 0.54
HCFC1P51610 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HCFC1P51610 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HCFC1P51610 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.43■□□□□ 0.54
HCFC1P51610 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.43■□□□□ 0.54
HCFC1P51610 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HCFC1P51610 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms