Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK9P50750 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK9P50750 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDK9P50750 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK9P50750 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CDK9P50750 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
CDK9P50750 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK9P50750 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.22■□□□□ 0.83
CDK9P50750 AC091305.1-201ENST00000479476 895 ntBASIC20.22■□□□□ 0.83
CDK9P50750 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.22■□□□□ 0.83
CDK9P50750 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK9P50750 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CDK9P50750 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CDK9P50750 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDK9P50750 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK9P50750 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CDK9P50750 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDK9P50750 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CDK9P50750 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK9P50750 BX842568.3-201ENST00000418104 571 ntBASIC20.21■□□□□ 0.83
CDK9P50750 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.21■□□□□ 0.83
CDK9P50750 AC027682.1-201ENST00000562846 899 ntBASIC20.21■□□□□ 0.83
CDK9P50750 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CDK9P50750 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDK9P50750 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CDK9P50750 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK9P50750 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK9P50750 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.21■□□□□ 0.83
CDK9P50750 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.21■□□□□ 0.83
CDK9P50750 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK9P50750 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK9P50750 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDK9P50750 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.2■□□□□ 0.83
CDK9P50750 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK9P50750 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK9P50750 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK9P50750 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK9P50750 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.2■□□□□ 0.82
CDK9P50750 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK9P50750 AC008764.7-201ENST00000593779 1081 ntBASIC20.2■□□□□ 0.82
CDK9P50750 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK9P50750 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK9P50750 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.2■□□□□ 0.82
CDK9P50750 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK9P50750 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK9P50750 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDK9P50750 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK9P50750 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK9P50750 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK9P50750 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK9P50750 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK9P50750 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CDK9P50750 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK9P50750 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK9P50750 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK9P50750 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CDK9P50750 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.19■□□□□ 0.82
CDK9P50750 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK9P50750 RASA4CP-201ENST00000424092 1398 ntBASIC20.19■□□□□ 0.82
CDK9P50750 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.19■□□□□ 0.82
CDK9P50750 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK9P50750 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK9P50750 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK9P50750 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.18■□□□□ 0.82
CDK9P50750 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK9P50750 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK9P50750 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK9P50750 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.18■□□□□ 0.82
CDK9P50750 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK9P50750 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK9P50750 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK9P50750 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK9P50750 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK9P50750 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CDK9P50750 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK9P50750 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK9P50750 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK9P50750 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK9P50750 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK9P50750 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK9P50750 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.17■□□□□ 0.82
CDK9P50750 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
CDK9P50750 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK9P50750 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CDK9P50750 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK9P50750 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK9P50750 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK9P50750 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.17■□□□□ 0.82
CDK9P50750 AC233992.3-201ENST00000607491 485 ntBASIC20.17■□□□□ 0.82
CDK9P50750 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK9P50750 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK9P50750 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CDK9P50750 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.17■□□□□ 0.82
CDK9P50750 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.17■□□□□ 0.82
CDK9P50750 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK9P50750 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK9P50750 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK9P50750 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK9P50750 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDK9P50750 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms