Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.35■□□□□ 0.53
GSK3AP49840 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GSK3AP49840 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
GSK3AP49840 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GSK3AP49840 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GSK3AP49840 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GSK3AP49840 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.34■□□□□ 0.53
GSK3AP49840 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GSK3AP49840 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.34■□□□□ 0.53
GSK3AP49840 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GSK3AP49840 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.34■□□□□ 0.53
GSK3AP49840 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.34■□□□□ 0.53
GSK3AP49840 SUDS3P1-201ENST00000505831 966 ntBASIC18.34■□□□□ 0.53
GSK3AP49840 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
GSK3AP49840 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GSK3AP49840 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GSK3AP49840 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GSK3AP49840 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GSK3AP49840 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GSK3AP49840 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GSK3AP49840 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.33■□□□□ 0.53
GSK3AP49840 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GSK3AP49840 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GSK3AP49840 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GSK3AP49840 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.33■□□□□ 0.53
GSK3AP49840 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GSK3AP49840 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
GSK3AP49840 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GSK3AP49840 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GSK3AP49840 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GSK3AP49840 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GSK3AP49840 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GSK3AP49840 MIR572-201ENST00000384983 95 ntBASIC18.33■□□□□ 0.52
GSK3AP49840 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
GSK3AP49840 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.33■□□□□ 0.52
GSK3AP49840 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.33■□□□□ 0.52
GSK3AP49840 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
GSK3AP49840 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GSK3AP49840 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSK3AP49840 AC009237.3-201ENST00000393279 1427 ntBASIC18.32■□□□□ 0.52
GSK3AP49840 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.32■□□□□ 0.52
GSK3AP49840 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GSK3AP49840 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GSK3AP49840 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GSK3AP49840 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSK3AP49840 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSK3AP49840 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSK3AP49840 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSK3AP49840 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.32■□□□□ 0.52
GSK3AP49840 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSK3AP49840 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.32■□□□□ 0.52
GSK3AP49840 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GSK3AP49840 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GSK3AP49840 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSK3AP49840 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSK3AP49840 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GSK3AP49840 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GSK3AP49840 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
GSK3AP49840 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GSK3AP49840 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GSK3AP49840 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GSK3AP49840 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GSK3AP49840 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.31■□□□□ 0.52
GSK3AP49840 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
GSK3AP49840 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.31■□□□□ 0.52
GSK3AP49840 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.31■□□□□ 0.52
GSK3AP49840 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
GSK3AP49840 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GSK3AP49840 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GSK3AP49840 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.31■□□□□ 0.52
GSK3AP49840 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.31■□□□□ 0.52
GSK3AP49840 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.31■□□□□ 0.52
GSK3AP49840 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.31■□□□□ 0.52
GSK3AP49840 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.31■□□□□ 0.52
GSK3AP49840 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GSK3AP49840 LINC01521-201ENST00000504184 1943 ntBASIC18.31■□□□□ 0.52
GSK3AP49840 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
GSK3AP49840 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
GSK3AP49840 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GSK3AP49840 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GSK3AP49840 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GSK3AP49840 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GSK3AP49840 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GSK3AP49840 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GSK3AP49840 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GSK3AP49840 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GSK3AP49840 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GSK3AP49840 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.3■□□□□ 0.52
GSK3AP49840 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
GSK3AP49840 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.3■□□□□ 0.52
GSK3AP49840 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GSK3AP49840 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.3■□□□□ 0.52
GSK3AP49840 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GSK3AP49840 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GSK3AP49840 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
GSK3AP49840 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.3■□□□□ 0.52
GSK3AP49840 BX005040.4-201ENST00000637145 1518 ntBASIC18.29■□□□□ 0.52
GSK3AP49840 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GSK3AP49840 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GSK3AP49840 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms