Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.68■□□□□ 0.74
CLK1P49759 AC010525.1-201ENST00000585559 441 ntBASIC19.68■□□□□ 0.74
CLK1P49759 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLK1P49759 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK1P49759 LINC01521-201ENST00000504184 1943 ntBASIC19.68■□□□□ 0.74
CLK1P49759 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK1P49759 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLK1P49759 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK1P49759 AL157384.1-201ENST00000445995 2473 ntBASIC19.67■□□□□ 0.74
CLK1P49759 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CLK1P49759 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLK1P49759 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CLK1P49759 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.67■□□□□ 0.74
CLK1P49759 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLK1P49759 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CLK1P49759 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.67■□□□□ 0.74
CLK1P49759 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLK1P49759 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLK1P49759 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLK1P49759 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CLK1P49759 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.67■□□□□ 0.74
CLK1P49759 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLK1P49759 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLK1P49759 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLK1P49759 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLK1P49759 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLK1P49759 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLK1P49759 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLK1P49759 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CLK1P49759 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.66■□□□□ 0.74
CLK1P49759 AC010141.3-201ENST00000456659 717 ntBASIC19.66■□□□□ 0.74
CLK1P49759 AC027682.1-201ENST00000562846 899 ntBASIC19.66■□□□□ 0.74
CLK1P49759 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.66■□□□□ 0.74
CLK1P49759 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLK1P49759 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLK1P49759 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLK1P49759 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLK1P49759 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLK1P49759 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLK1P49759 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLK1P49759 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLK1P49759 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLK1P49759 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLK1P49759 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLK1P49759 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.65■□□□□ 0.74
CLK1P49759 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.65■□□□□ 0.74
CLK1P49759 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.65■□□□□ 0.74
CLK1P49759 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CLK1P49759 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLK1P49759 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLK1P49759 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CLK1P49759 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
CLK1P49759 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.65■□□□□ 0.74
CLK1P49759 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CLK1P49759 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CLK1P49759 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLK1P49759 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CLK1P49759 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLK1P49759 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLK1P49759 AC244015.2-201ENST00000616358 1861 ntBASIC19.65■□□□□ 0.74
CLK1P49759 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLK1P49759 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.64■□□□□ 0.74
CLK1P49759 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLK1P49759 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLK1P49759 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
CLK1P49759 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLK1P49759 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLK1P49759 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLK1P49759 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.64■□□□□ 0.73
CLK1P49759 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.64■□□□□ 0.73
CLK1P49759 AC138932.1-201ENST00000534164 6830 ntBASIC19.64■□□□□ 0.73
CLK1P49759 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLK1P49759 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLK1P49759 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK1P49759 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK1P49759 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLK1P49759 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK1P49759 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.63■□□□□ 0.73
CLK1P49759 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLK1P49759 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CLK1P49759 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLK1P49759 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK1P49759 RASA4CP-201ENST00000424092 1398 ntBASIC19.63■□□□□ 0.73
CLK1P49759 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.63■□□□□ 0.73
CLK1P49759 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.63■□□□□ 0.73
CLK1P49759 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLK1P49759 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK1P49759 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK1P49759 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK1P49759 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLK1P49759 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK1P49759 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLK1P49759 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK1P49759 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLK1P49759 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.62■□□□□ 0.73
CLK1P49759 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLK1P49759 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLK1P49759 MIR939-201ENST00000401314 82 ntBASIC19.62■□□□□ 0.73
CLK1P49759 AC091305.1-201ENST00000479476 895 ntBASIC19.62■□□□□ 0.73
CLK1P49759 AP001330.3-201ENST00000520123 633 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms