Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 CHMP1A-205ENST00000548650 566 ntTSL 318.95■□□□□ 0.621e-6■■■■□ 20.6
AARSP49588 TXNRD2-213ENST00000487165 2020 ntTSL 1 (best)18.58■□□□□ 0.561e-6■■■■□ 20.6
AARSP49588 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.536e-8■■■■□ 20.6
AARSP49588 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.29■□□□□ 0.521e-6■■■■□ 20.6
AARSP49588 TXNRD2-219ENST00000634471 748 ntTSL 318.28■□□□□ 0.521e-6■■■■□ 20.6
AARSP49588 TXNRD2-207ENST00000462843 810 ntTSL 318.28■□□□□ 0.521e-6■■■■□ 20.6
AARSP49588 SLC37A4-204ENST00000525039 1780 ntTSL 1 (best)18.07■□□□□ 0.486e-8■■■■□ 20.6
AARSP49588 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.411e-6■■■■□ 20.6
AARSP49588 PLEKHM2-204ENST00000477849 1057 ntTSL 517.54■□□□□ 0.41e-6■■■■□ 20.6
AARSP49588 STK11-207ENST00000589152 3365 ntTSL 217.39■□□□□ 0.371e-6■■■■□ 20.6
AARSP49588 CCNL2-219ENST00000497013 548 ntTSL 217.32■□□□□ 0.361e-6■■■■□ 20.6
AARSP49588 SLC37A4-212ENST00000530407 1472 ntTSL 217.24■□□□□ 0.356e-8■■■■□ 20.6
AARSP49588 SLC37A4-213ENST00000532085 5862 ntTSL 1 (best)17.18■□□□□ 0.346e-8■■■■□ 20.6
AARSP49588 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.1■□□□□ 0.331e-6■■■■□ 20.6
AARSP49588 TXNRD2-215ENST00000494454 2004 ntTSL 1 (best)16.78■□□□□ 0.281e-6■■■■□ 20.6
AARSP49588 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.261e-6■■■■□ 20.6
AARSP49588 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.59■□□□□ 0.251e-6■■■■□ 20.6
AARSP49588 CCNL2-215ENST00000482621 2059 ntTSL 216.55■□□□□ 0.241e-6■■■■□ 20.6
AARSP49588 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.41■□□□□ 0.226e-8■■■■□ 20.6
AARSP49588 GYPC-205ENST00000464053 1805 ntTSL 1 (best)16.41■□□□□ 0.221e-6■■■■□ 20.6
AARSP49588 SLC37A4-219ENST00000638360 1912 ntTSL 516.11■□□□□ 0.176e-8■■■■□ 20.6
AARSP49588 KMT2D-207ENST00000552391 860 ntTSL 516.07■□□□□ 0.161e-6■■■■□ 20.6
AARSP49588 CCNL2-207ENST00000463895 385 ntTSL 215.82■□□□□ 0.121e-6■■■■□ 20.6
AARSP49588 SLC37A4-215ENST00000534384 554 ntTSL 415.78■□□□□ 0.126e-8■■■■□ 20.6
AARSP49588 UBE2L3-203ENST00000496722 3451 ntTSL 215.73■□□□□ 0.111e-6■■■■□ 20.6
AARSP49588 GYPC-204ENST00000459787 758 ntTSL 315.54■□□□□ 0.081e-6■■■■□ 20.6
AARSP49588 CHMP1A-210ENST00000551981 689 ntTSL 215.42■□□□□ 0.061e-6■■■■□ 20.6
AARSP49588 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.35■□□□□ 0.051e-6■■■■□ 20.6
AARSP49588 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.031e-6■■■■□ 20.6
AARSP49588 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC15.2■□□□□ 0.021e-6■■■■□ 20.6
AARSP49588 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.026e-8■■■■□ 20.6
AARSP49588 TXNRD2-216ENST00000495655 2700 ntTSL 215.17■□□□□ 0.021e-6■■■■□ 20.6
AARSP49588 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.14■□□□□ 0.011e-6■■■■□ 20.6
AARSP49588 STK11-202ENST00000585465 3554 ntTSL 515.14■□□□□ 0.011e-6■■■■□ 20.6
AARSP49588 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -01e-6■■■■□ 20.6
AARSP49588 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.93□□□□□ -0.021e-6■■■■□ 20.6
AARSP49588 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC14.93□□□□□ -0.026e-8■■■■□ 20.6
AARSP49588 SLC37A4-210ENST00000527992 2040 ntTSL 1 (best)14.82□□□□□ -0.046e-8■■■■□ 20.6
AARSP49588 SLC37A4-205ENST00000525102 2844 ntTSL 214.78□□□□□ -0.046e-8■■■■□ 20.6
AARSP49588 CCNL2-218ENST00000496007 4452 ntTSL 214.74□□□□□ -0.051e-6■■■■□ 20.6
AARSP49588 SLC37A4-218ENST00000638186 2074 ntTSL 514.63□□□□□ -0.076e-8■■■■□ 20.6
AARSP49588 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.11e-6■■■■□ 20.6
AARSP49588 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.43□□□□□ -0.11e-6■■■■□ 20.6
AARSP49588 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC14.38□□□□□ -0.111e-6■■■■□ 20.6
AARSP49588 SLC37A4-220ENST00000638925 2046 ntTSL 514.3□□□□□ -0.126e-8■■■■□ 20.6
AARSP49588 CCNL2-209ENST00000471930 846 ntTSL 513.91□□□□□ -0.181e-6■■■■□ 20.6
AARSP49588 CCNL2-210ENST00000473872 557 ntTSL 213.89□□□□□ -0.191e-6■■■■□ 20.6
AARSP49588 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.191e-6■■■■□ 20.6
AARSP49588 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC13.84□□□□□ -0.191e-6■■■■□ 20.6
AARSP49588 VEGFA-216ENST00000512683 475 ntTSL 1 (best)13.7□□□□□ -0.221e-6■■■■□ 20.6
AARSP49588 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.231e-6■■■■□ 20.6
AARSP49588 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.231e-6■■■■□ 20.6
AARSP49588 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC13.46□□□□□ -0.251e-6■■■■□ 20.6
AARSP49588 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC13.46□□□□□ -0.251e-6■■■■□ 20.6
AARSP49588 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.251e-6■■■■□ 20.6
AARSP49588 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.291e-6■■■■□ 20.6
AARSP49588 CD164-204ENST00000413644 2414 ntTSL 1 (best) BASIC12.98□□□□□ -0.331e-6■■■■□ 20.6
AARSP49588 UBE2L3-202ENST00000458578 3007 ntTSL 2 BASIC12.97□□□□□ -0.331e-6■■■■□ 20.6
AARSP49588 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.361e-6■■■■□ 20.6
AARSP49588 ATN1-202ENST00000396684 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.441e-6■■■■□ 20.6
AARSP49588 CEP192-204ENST00000507064 706 ntTSL 312.21□□□□□ -0.451e-6■■■■□ 20.6
AARSP49588 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.531e-6■■■■□ 20.6
AARSP49588 MTR-205ENST00000535889 10405 ntTSL 1 (best) BASIC11.49□□□□□ -0.571e-6■■■■□ 20.6
AARSP49588 CD164-202ENST00000310786 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.61e-6■■■■□ 20.6
AARSP49588 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC10.93□□□□□ -0.661e-6■■■■□ 20.6
AARSP49588 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC10.02□□□□□ -0.811e-6■■■■□ 20.6
AARSP49588 MTR-203ENST00000463959 1972 ntTSL 59.23□□□□□ -0.931e-6■■■■□ 20.6
AARSP49588 CEP192-214ENST00000589596 3793 ntAPPRIS ALT2 TSL 28□□□□□ -1.131e-6■■■■□ 20.6
AARSP49588 CUX1-220ENST00000607092 559 ntTSL 36.83□□□□□ -1.321e-6■■■■□ 20.6
AARSP49588 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.24□□□□□ -1.411e-6■■■■□ 20.6
AARSP49588 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.06□□□□□ -1.441e-6■■■■□ 20.6
AARSP49588 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.591e-6■■■■□ 20.6
AARSP49588 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.89□□□□□ -1.631e-6■■■■□ 20.6
AARSP49588 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.631e-6■■■■□ 20.6
AARSP49588 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.62□□□□□ -1.671e-6■■■■□ 20.6
AARSP49588 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.711e-6■■■■□ 20.6
AARSP49588 SMAP1-204ENST00000439432 419 ntTSL 33.74□□□□□ -1.811e-6■■■■□ 20.6
AARSP49588 CD164-206ENST00000499860 2845 ntTSL 1 (best)2.45□□□□□ -2.021e-6■■■■□ 20.6
AARSP49588 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.834e-6■■■■□ 20.5
AARSP49588 RBM33-209ENST00000440108 1027 ntTSL 519.27■□□□□ 0.684e-6■■■■□ 20.5
AARSP49588 RBM33-210ENST00000486747 559 ntTSL 318.47■□□□□ 0.554e-6■■■■□ 20.5
AARSP49588 RBM33-206ENST00000392761 2934 ntTSL 215.57■□□□□ 0.084e-6■■■■□ 20.5
AARSP49588 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.44e-6■■■■□ 20.5
AARSP49588 RBM33-202ENST00000307403 4360 ntTSL 210.7□□□□□ -0.74e-6■■■■□ 20.5
AARSP49588 TAL1-204ENST00000464796 237 ntTSL 1 (best)9.57□□□□□ -0.884e-6■■■■□ 20.5
AARSP49588 RNF126-207ENST00000605891 1671 ntTSL 533.49■■■□□ 2.953e-6■■■■□ 20.4
AARSP49588 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.543e-6■■■■□ 20.4
AARSP49588 RNF126-203ENST00000589762 963 ntTSL 228.53■■■□□ 2.163e-6■■■■□ 20.4
AARSP49588 EIF1-204ENST00000469308 815 ntTSL 224.53■■□□□ 1.523e-6■■■■□ 20.4
AARSP49588 RNF126-205ENST00000591394 733 ntTSL 224.42■■□□□ 1.53e-6■■■■□ 20.4
AARSP49588 RNF126-206ENST00000592626 652 ntTSL 220.45■□□□□ 0.863e-6■■■■□ 20.4
AARSP49588 EIF1-202ENST00000462917 2170 ntTSL 1 (best)20.19■□□□□ 0.823e-6■■■■□ 20.4
AARSP49588 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.453e-6■■■■□ 20.4
AARSP49588 EIF1-201ENST00000310837 1120 ntTSL 1 (best)9.74□□□□□ -0.853e-6■■■■□ 20.4
AARSP49588 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8□□□□□ -1.133e-6■■■■□ 20.4
AARSP49588 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.153e-6■■■■□ 20.4
AARSP49588 EIF1-205ENST00000482111 1428 ntTSL 26.38□□□□□ -1.393e-6■■■■□ 20.4
AARSP49588 SNORD111-201ENST00000408139 94 ntBASIC1.11□□□□□ -2.233e-10■■■■□ 20.4
AARSP49588 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.7■□□□□ 0.584e-12■■■■□ 20.4
AARSP49588 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC12.81□□□□□ -0.364e-12■■■■□ 20.4
Retrieved 100 of 8,200 protein–RNA pairs in 73.9 ms