Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.49■□□□□ 0.55
CX3CR1P49238 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CX3CR1P49238 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.49■□□□□ 0.55
CX3CR1P49238 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CX3CR1P49238 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CX3CR1P49238 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CX3CR1P49238 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CX3CR1P49238 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CX3CR1P49238 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CX3CR1P49238 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.49■□□□□ 0.55
CX3CR1P49238 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CX3CR1P49238 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.48■□□□□ 0.55
CX3CR1P49238 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.48■□□□□ 0.55
CX3CR1P49238 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CX3CR1P49238 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CX3CR1P49238 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.48■□□□□ 0.55
CX3CR1P49238 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CX3CR1P49238 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.48■□□□□ 0.55
CX3CR1P49238 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CX3CR1P49238 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.48■□□□□ 0.55
CX3CR1P49238 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.48■□□□□ 0.55
CX3CR1P49238 AF213884.3-201ENST00000563833 479 ntBASIC18.48■□□□□ 0.55
CX3CR1P49238 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CX3CR1P49238 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.48■□□□□ 0.55
CX3CR1P49238 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.48■□□□□ 0.55
CX3CR1P49238 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CX3CR1P49238 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CX3CR1P49238 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CX3CR1P49238 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
CX3CR1P49238 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CX3CR1P49238 AC009237.3-201ENST00000393279 1427 ntBASIC18.48■□□□□ 0.55
CX3CR1P49238 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CX3CR1P49238 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CX3CR1P49238 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CX3CR1P49238 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CX3CR1P49238 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CX3CR1P49238 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.47■□□□□ 0.55
CX3CR1P49238 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.47■□□□□ 0.55
CX3CR1P49238 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CX3CR1P49238 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.47■□□□□ 0.55
CX3CR1P49238 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.47■□□□□ 0.55
CX3CR1P49238 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.47■□□□□ 0.55
CX3CR1P49238 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CX3CR1P49238 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CX3CR1P49238 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CX3CR1P49238 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CX3CR1P49238 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
CX3CR1P49238 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.46■□□□□ 0.55
CX3CR1P49238 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.46■□□□□ 0.55
CX3CR1P49238 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CX3CR1P49238 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CX3CR1P49238 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CX3CR1P49238 RASA4CP-201ENST00000424092 1398 ntBASIC18.46■□□□□ 0.55
CX3CR1P49238 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CX3CR1P49238 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CX3CR1P49238 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CX3CR1P49238 MIR939-201ENST00000401314 82 ntBASIC18.46■□□□□ 0.55
CX3CR1P49238 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CX3CR1P49238 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
CX3CR1P49238 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CX3CR1P49238 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
CX3CR1P49238 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
CX3CR1P49238 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.46■□□□□ 0.55
CX3CR1P49238 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CX3CR1P49238 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CX3CR1P49238 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
CX3CR1P49238 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CX3CR1P49238 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.45■□□□□ 0.54
CX3CR1P49238 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CX3CR1P49238 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CX3CR1P49238 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CX3CR1P49238 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.45■□□□□ 0.54
CX3CR1P49238 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CX3CR1P49238 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CX3CR1P49238 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.45■□□□□ 0.54
CX3CR1P49238 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
CX3CR1P49238 AC091305.1-201ENST00000479476 895 ntBASIC18.45■□□□□ 0.54
CX3CR1P49238 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CX3CR1P49238 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CX3CR1P49238 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.45■□□□□ 0.54
CX3CR1P49238 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CX3CR1P49238 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.45■□□□□ 0.54
CX3CR1P49238 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CX3CR1P49238 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CX3CR1P49238 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CX3CR1P49238 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CX3CR1P49238 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CX3CR1P49238 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CX3CR1P49238 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CX3CR1P49238 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CX3CR1P49238 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CX3CR1P49238 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CX3CR1P49238 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CX3CR1P49238 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CX3CR1P49238 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CX3CR1P49238 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CX3CR1P49238 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CX3CR1P49238 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CX3CR1P49238 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CX3CR1P49238 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms