Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC9A3P48764 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC9A3P48764 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SLC9A3P48764 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC9A3P48764 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC9A3P48764 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.25■□□□□ 0.67
SLC9A3P48764 BX842568.3-201ENST00000418104 571 ntBASIC19.25■□□□□ 0.67
SLC9A3P48764 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC9A3P48764 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC9A3P48764 AL157384.1-201ENST00000445995 2473 ntBASIC19.25■□□□□ 0.67
SLC9A3P48764 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SLC9A3P48764 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC9A3P48764 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SLC9A3P48764 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC9A3P48764 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC9A3P48764 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLC9A3P48764 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC9A3P48764 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC9A3P48764 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC9A3P48764 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC9A3P48764 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC9A3P48764 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC9A3P48764 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC9A3P48764 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC9A3P48764 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC9A3P48764 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.24■□□□□ 0.67
SLC9A3P48764 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.24■□□□□ 0.67
SLC9A3P48764 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC9A3P48764 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC9A3P48764 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC9A3P48764 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC9A3P48764 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC9A3P48764 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC9A3P48764 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
SLC9A3P48764 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC9A3P48764 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
SLC9A3P48764 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC9A3P48764 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC9A3P48764 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC9A3P48764 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SLC9A3P48764 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC9A3P48764 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC9A3P48764 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC9A3P48764 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC9A3P48764 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC9A3P48764 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC9A3P48764 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SLC9A3P48764 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC9A3P48764 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC9A3P48764 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
SLC9A3P48764 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC9A3P48764 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC9A3P48764 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SLC9A3P48764 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC9A3P48764 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC9A3P48764 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC9A3P48764 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC9A3P48764 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC9A3P48764 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SLC9A3P48764 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC9A3P48764 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC9A3P48764 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SLC9A3P48764 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC9A3P48764 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC9A3P48764 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC9A3P48764 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC9A3P48764 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC9A3P48764 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC9A3P48764 AC003102.1-202ENST00000563394 1796 ntBASIC19.21■□□□□ 0.67
SLC9A3P48764 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC9A3P48764 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC9A3P48764 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC9A3P48764 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC9A3P48764 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SLC9A3P48764 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SLC9A3P48764 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC9A3P48764 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC9A3P48764 MIR4767-201ENST00000582827 78 ntBASIC19.21■□□□□ 0.67
SLC9A3P48764 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC9A3P48764 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SLC9A3P48764 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
SLC9A3P48764 AP006587.3-201ENST00000525742 1516 ntBASIC19.2■□□□□ 0.66
SLC9A3P48764 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC9A3P48764 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC9A3P48764 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC9A3P48764 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC9A3P48764 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC9A3P48764 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC9A3P48764 UNC93B3-201ENST00000308076 687 ntBASIC19.2■□□□□ 0.66
SLC9A3P48764 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SLC9A3P48764 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC9A3P48764 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC9A3P48764 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.2■□□□□ 0.66
SLC9A3P48764 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC9A3P48764 AC133561.4-201ENST00000566112 224 ntBASIC19.2■□□□□ 0.66
SLC9A3P48764 AC233992.3-201ENST00000607491 485 ntBASIC19.2■□□□□ 0.66
SLC9A3P48764 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC9A3P48764 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC9A3P48764 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC9A3P48764 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms