Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PCP4P48539 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.69□□□□□ -0.06
PCP4P48539 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCP4P48539 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCP4P48539 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC14.69□□□□□ -0.06
PCP4P48539 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCP4P48539 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.68□□□□□ -0.06
PCP4P48539 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCP4P48539 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCP4P48539 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCP4P48539 AL136379.1-201ENST00000623471 2642 ntBASIC14.68□□□□□ -0.06
PCP4P48539 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.68□□□□□ -0.06
PCP4P48539 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCP4P48539 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCP4P48539 AC018470.1-201ENST00000624790 3129 ntBASIC14.68□□□□□ -0.06
PCP4P48539 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCP4P48539 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.68□□□□□ -0.06
PCP4P48539 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCP4P48539 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCP4P48539 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCP4P48539 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCP4P48539 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.68□□□□□ -0.06
PCP4P48539 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCP4P48539 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCP4P48539 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
PCP4P48539 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCP4P48539 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCP4P48539 HTR7P1-202ENST00000624664 4411 ntBASIC14.67□□□□□ -0.06
PCP4P48539 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
PCP4P48539 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PCP4P48539 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PCP4P48539 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCP4P48539 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
PCP4P48539 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.66□□□□□ -0.06
PCP4P48539 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCP4P48539 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.66□□□□□ -0.06
PCP4P48539 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCP4P48539 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCP4P48539 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
PCP4P48539 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PCP4P48539 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCP4P48539 PCDHAC2-203ENST00000615316 3011 ntBASIC14.66□□□□□ -0.06
PCP4P48539 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCP4P48539 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCP4P48539 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.65□□□□□ -0.06
PCP4P48539 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.65□□□□□ -0.06
PCP4P48539 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCP4P48539 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCP4P48539 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PCP4P48539 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCP4P48539 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.65□□□□□ -0.06
PCP4P48539 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCP4P48539 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCP4P48539 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCP4P48539 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCP4P48539 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCP4P48539 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCP4P48539 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCP4P48539 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCP4P48539 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCP4P48539 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
PCP4P48539 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.65□□□□□ -0.07
PCP4P48539 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCP4P48539 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCP4P48539 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.64□□□□□ -0.07
PCP4P48539 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.64□□□□□ -0.07
PCP4P48539 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PCP4P48539 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.64□□□□□ -0.07
PCP4P48539 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCP4P48539 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
PCP4P48539 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCP4P48539 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCP4P48539 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCP4P48539 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCP4P48539 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCP4P48539 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC14.64□□□□□ -0.07
PCP4P48539 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.64□□□□□ -0.07
PCP4P48539 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCP4P48539 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms