Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC6A12P48065 LINC02228-203ENST00000641970 1355 ntBASIC20.4■□□□□ 0.86
SLC6A12P48065 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A12P48065 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A12P48065 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A12P48065 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.39■□□□□ 0.86
SLC6A12P48065 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SLC6A12P48065 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC6A12P48065 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.39■□□□□ 0.86
SLC6A12P48065 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SLC6A12P48065 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC6A12P48065 KRT87P-202ENST00000534226 1464 ntBASIC20.39■□□□□ 0.85
SLC6A12P48065 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.39■□□□□ 0.85
SLC6A12P48065 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC6A12P48065 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC6A12P48065 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC6A12P48065 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC6A12P48065 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A12P48065 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A12P48065 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A12P48065 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A12P48065 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SLC6A12P48065 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A12P48065 YBX1P1-201ENST00000445822 960 ntBASIC20.38■□□□□ 0.85
SLC6A12P48065 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC6A12P48065 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SLC6A12P48065 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC6A12P48065 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A12P48065 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC6A12P48065 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A12P48065 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.37■□□□□ 0.85
SLC6A12P48065 TERF1P2-201ENST00000583350 1212 ntBASIC20.37■□□□□ 0.85
SLC6A12P48065 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.37■□□□□ 0.85
SLC6A12P48065 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC6A12P48065 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A12P48065 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A12P48065 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A12P48065 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A12P48065 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A12P48065 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SLC6A12P48065 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
SLC6A12P48065 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A12P48065 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A12P48065 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A12P48065 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
SLC6A12P48065 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC6A12P48065 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC6A12P48065 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A12P48065 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC6A12P48065 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC6A12P48065 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A12P48065 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A12P48065 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A12P48065 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A12P48065 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A12P48065 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A12P48065 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A12P48065 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A12P48065 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SLC6A12P48065 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SLC6A12P48065 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SLC6A12P48065 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A12P48065 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A12P48065 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A12P48065 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SLC6A12P48065 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A12P48065 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A12P48065 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A12P48065 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A12P48065 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A12P48065 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC6A12P48065 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A12P48065 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC6A12P48065 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SLC6A12P48065 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC6A12P48065 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.33■□□□□ 0.85
SLC6A12P48065 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC6A12P48065 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC6A12P48065 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SLC6A12P48065 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC6A12P48065 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC6A12P48065 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC6A12P48065 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC6A12P48065 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC6A12P48065 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SLC6A12P48065 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.33■□□□□ 0.84
SLC6A12P48065 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC6A12P48065 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SLC6A12P48065 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC6A12P48065 AC019069.1-201ENST00000610008 1333 ntBASIC20.32■□□□□ 0.84
SLC6A12P48065 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC6A12P48065 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC6A12P48065 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC6A12P48065 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.32■□□□□ 0.84
SLC6A12P48065 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC6A12P48065 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC6A12P48065 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC6A12P48065 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.32■□□□□ 0.84
SLC6A12P48065 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC6A12P48065 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms