Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 NBP1YLR457C 960 nt3.1□□□□□ -1.91
SSN8P47821 BUD21YOR078W 645 nt3.1□□□□□ -1.91
SSN8P47821 CCM1YGR150C 2595 nt3.1□□□□□ -1.91
SSN8P47821 ARG2YJL071W 1725 nt3.1□□□□□ -1.91
SSN8P47821 CDC5YMR001C 2118 nt3.1□□□□□ -1.91
SSN8P47821 MSD1YPL104W 1977 nt3.09□□□□□ -1.91
SSN8P47821 SRC1YML034W 2505 nt3.09□□□□□ -1.91
SSN8P47821 CWC2YDL209C 1020 nt3.09□□□□□ -1.91
SSN8P47821 ECM11YDR446W 909 nt3.09□□□□□ -1.91
SSN8P47821 MFA1YDR461W 111 nt3.09□□□□□ -1.91
SSN8P47821 SPT2YER161C 1002 nt3.09□□□□□ -1.91
SSN8P47821 MIG2YGL209W 1149 nt3.09□□□□□ -1.91
SSN8P47821 UPF3YGR072W 1164 nt3.09□□□□□ -1.91
SSN8P47821 NNF1YJR112W 606 nt3.09□□□□□ -1.91
SSN8P47821 YKL065W-AYKL065W-A 222 nt3.09□□□□□ -1.91
SSN8P47821 YLR050CYLR050C 486 nt3.09□□□□□ -1.91
SSN8P47821 YBL028CYBL028C 321 nt3.09□□□□□ -1.91
SSN8P47821 RIM11YMR139W 1113 nt3.09□□□□□ -1.91
SSN8P47821 YPR108W-AYPR108W-A 213 nt3.09□□□□□ -1.91
SSN8P47821 SIZ1YDR409W 2715 nt3.09□□□□□ -1.92
SSN8P47821 SPT10YJL127C 1923 nt3.09□□□□□ -1.92
SSN8P47821 YML096WYML096W 1578 nt3.08□□□□□ -1.92
SSN8P47821 MDN1YLR106C 14733 nt3.08□□□□□ -1.92
SSN8P47821 EBS1YDR206W 2655 nt3.08□□□□□ -1.92
SSN8P47821 PIG2YIL045W 1617 nt3.08□□□□□ -1.92
SSN8P47821 CLB3YDL155W 1284 nt3.08□□□□□ -1.92
SSN8P47821 RMD6YEL072W 696 nt3.08□□□□□ -1.92
SSN8P47821 AIM18YHR198C 966 nt3.08□□□□□ -1.92
SSN8P47821 PHD1YKL043W 1101 nt3.08□□□□□ -1.92
SSN8P47821 OCA2YNL056W 594 nt3.08□□□□□ -1.92
SSN8P47821 AAR2YBL074C 1068 nt3.08□□□□□ -1.92
SSN8P47821 YNR025CYNR025C 360 nt3.08□□□□□ -1.92
SSN8P47821 PEX11YOL147C 711 nt3.08□□□□□ -1.92
SSN8P47821 DGA1YOR245C 1257 nt3.08□□□□□ -1.92
SSN8P47821 RPA43YOR340C 981 nt3.08□□□□□ -1.92
SSN8P47821 YPR153WYPR153W 423 nt3.08□□□□□ -1.92
SSN8P47821 CHA4YLR098C 1947 nt3.08□□□□□ -1.92
SSN8P47821 TGL3YMR313C 1929 nt3.08□□□□□ -1.92
SSN8P47821 TRS120YDR407C 3870 nt3.08□□□□□ -1.92
SSN8P47821 YBL005W-AYBL005W-A 1323 nt3.08□□□□□ -1.92
SSN8P47821 ESA1YOR244W 1338 nt3.08□□□□□ -1.92
SSN8P47821 RRN6YBL014C 2685 nt3.08□□□□□ -1.92
SSN8P47821 SLA1YBL007C 3735 nt3.08□□□□□ -1.92
SSN8P47821 FLO1YAR050W 4614 nt3.08□□□□□ -1.92
SSN8P47821 EMP70YLR083C 2004 nt3.07□□□□□ -1.92
SSN8P47821 RPS0AYGR214W 759 nt3.07□□□□□ -1.92
SSN8P47821 PET54YGR222W 882 nt3.07□□□□□ -1.92
SSN8P47821 YKL115CYKL115C 393 nt3.07□□□□□ -1.92
SSN8P47821 YKL123WYKL123W 381 nt3.07□□□□□ -1.92
SSN8P47821 NNT1YLR285W 786 nt3.07□□□□□ -1.92
SSN8P47821 ARL3YPL051W 597 nt3.07□□□□□ -1.92
SSN8P47821 KAR4YCL055W 1008 nt3.07□□□□□ -1.92
SSN8P47821 ATP25YMR098C 1839 nt3.07□□□□□ -1.92
SSN8P47821 AUS1YOR011W 4185 nt3.07□□□□□ -1.92
SSN8P47821 SEC27YGL137W 2670 nt3.06□□□□□ -1.92
SSN8P47821 COP1YDL145C 3606 nt3.06□□□□□ -1.92
SSN8P47821 VAB2YEL005C 849 nt3.06□□□□□ -1.92
SSN8P47821 BRR6YGL247W 594 nt3.06□□□□□ -1.92
SSN8P47821 PHO81YGR233C 3537 nt3.06□□□□□ -1.92
SSN8P47821 TMA19YKL056C 504 nt3.06□□□□□ -1.92
SSN8P47821 YLR271WYLR271W 825 nt3.06□□□□□ -1.92
SSN8P47821 YLR416CYLR416C 399 nt3.06□□□□□ -1.92
SSN8P47821 RPL13BYMR142C 600 nt3.06□□□□□ -1.92
SSN8P47821 PIN4YBL051C 2007 nt3.06□□□□□ -1.92
SSN8P47821 MCA1YOR197W 1299 nt3.06□□□□□ -1.92
SSN8P47821 YBR137WYBR137W 540 nt3.06□□□□□ -1.92
SSN8P47821 POP7YBR167C 423 nt3.06□□□□□ -1.92
SSN8P47821 NGG1YDR176W 2109 nt3.05□□□□□ -1.92
SSN8P47821 REF2YDR195W 1602 nt3.05□□□□□ -1.92
SSN8P47821 TRM82YDR165W 1335 nt3.05□□□□□ -1.92
SSN8P47821 RPL1BYGL135W 654 nt3.05□□□□□ -1.92
SSN8P47821 GOS1YHL031C 672 nt3.05□□□□□ -1.92
SSN8P47821 YHR054CYHR054C 1065 nt3.05□□□□□ -1.92
SSN8P47821 RPN13YLR421C 471 nt3.05□□□□□ -1.92
SSN8P47821 BET5YML077W 480 nt3.05□□□□□ -1.92
SSN8P47821 YSF3YNL138W-A 258 nt3.05□□□□□ -1.92
SSN8P47821 BRX1YOL077C 876 nt3.05□□□□□ -1.92
SSN8P47821 YOR387CYOR387C 621 nt3.05□□□□□ -1.92
SSN8P47821 RPL1AYPL220W 654 nt3.05□□□□□ -1.92
SSN8P47821 POL30YBR088C 777 nt3.05□□□□□ -1.92
SSN8P47821 VIP1YLR410W 3441 nt3.05□□□□□ -1.92
SSN8P47821 URK1YNR012W 1506 nt3.04□□□□□ -1.92
SSN8P47821 ARP5YNL059C 2268 nt3.04□□□□□ -1.92
SSN8P47821 FRE2YKL220C 2136 nt3.04□□□□□ -1.92
SSN8P47821 YPD1YDL235C 504 nt3.04□□□□□ -1.92
SSN8P47821 YGR115CYGR115C 780 nt3.04□□□□□ -1.92
SSN8P47821 IME1YJR094C 1083 nt3.04□□□□□ -1.92
SSN8P47821 HMX1YLR205C 954 nt3.04□□□□□ -1.92
SSN8P47821 YNR062CYNR062C 984 nt3.04□□□□□ -1.92
SSN8P47821 SRL1YOR247W 633 nt3.04□□□□□ -1.92
SSN8P47821 ITT1YML068W 1395 nt3.03□□□□□ -1.92
SSN8P47821 KRE2YDR483W 1329 nt3.03□□□□□ -1.92
SSN8P47821 VMA8YEL051W 771 nt3.03□□□□□ -1.92
SSN8P47821 YFR009W-AYFR009W-A 258 nt3.03□□□□□ -1.92
SSN8P47821 LIF1YGL090W 1266 nt3.03□□□□□ -1.92
SSN8P47821 PAU13YHL046C 363 nt3.03□□□□□ -1.92
SSN8P47821 VMA5YKL080W 1179 nt3.03□□□□□ -1.92
SSN8P47821 RNH203YLR154C 333 nt3.03□□□□□ -1.92
SSN8P47821 FAR3YMR052W 615 nt3.03□□□□□ -1.92
SSN8P47821 HHF1YBR009C 312 nt3.03□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms