Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 MRPL40YPL173W 894 nt3.97□□□□□ -1.77
TDP1P38319 YPL185WYPL185W 396 nt3.97□□□□□ -1.77
TDP1P38319 GPX2YBR244W 489 nt3.97□□□□□ -1.77
TDP1P38319 YKL075CYKL075C 1353 nt3.97□□□□□ -1.77
TDP1P38319 DBP3YGL078C 1572 nt3.97□□□□□ -1.77
TDP1P38319 MRH4YGL064C 1686 nt3.97□□□□□ -1.77
TDP1P38319 THR4YCR053W 1545 nt3.96□□□□□ -1.78
TDP1P38319 EPO1YMR124W 2832 nt3.96□□□□□ -1.78
TDP1P38319 VPS45YGL095C 1734 nt3.96□□□□□ -1.78
TDP1P38319 NCR1YPL006W 3513 nt3.96□□□□□ -1.78
TDP1P38319 MET32YDR253C 576 nt3.96□□□□□ -1.78
TDP1P38319 HUR1YGL168W 333 nt3.96□□□□□ -1.78
TDP1P38319 QCR10YHR001W-A 234 nt3.96□□□□□ -1.78
TDP1P38319 EFB1YAL003W 621 nt3.96□□□□□ -1.78
TDP1P38319 YJR038CYJR038C 363 nt3.96□□□□□ -1.78
TDP1P38319 ENV10YLR065C 546 nt3.96□□□□□ -1.78
TDP1P38319 YLR364C-AYLR364C-A 123 nt3.96□□□□□ -1.78
TDP1P38319 OCA2YNL056W 594 nt3.96□□□□□ -1.78
TDP1P38319 SIL1YOL031C 1266 nt3.96□□□□□ -1.78
TDP1P38319 NGL1YOL042W 1092 nt3.96□□□□□ -1.78
TDP1P38319 MSN1YOL116W 1149 nt3.96□□□□□ -1.78
TDP1P38319 YOR248WYOR248W 303 nt3.96□□□□□ -1.78
TDP1P38319 VID24YBR105C 1089 nt3.96□□□□□ -1.78
TDP1P38319 GDT1YBR187W 843 nt3.96□□□□□ -1.78
TDP1P38319 HCM1YCR065W 1695 nt3.96□□□□□ -1.78
TDP1P38319 YPS7YDR349C 1791 nt3.96□□□□□ -1.78
TDP1P38319 NTH1YDR001C 2256 nt3.96□□□□□ -1.78
TDP1P38319 YPR148CYPR148C 1308 nt3.95□□□□□ -1.78
TDP1P38319 SSH4YKL124W 1740 nt3.95□□□□□ -1.78
TDP1P38319 BUD5YCR038C 1929 nt3.95□□□□□ -1.78
TDP1P38319 FAA1YOR317W 2103 nt3.95□□□□□ -1.78
TDP1P38319 LTV1YKL143W 1392 nt3.95□□□□□ -1.78
TDP1P38319 YCR064CYCR064C 411 nt3.95□□□□□ -1.78
TDP1P38319 SPC19YDR201W 498 nt3.95□□□□□ -1.78
TDP1P38319 RPS18AYDR450W 441 nt3.95□□□□□ -1.78
TDP1P38319 VMA8YEL051W 771 nt3.95□□□□□ -1.78
TDP1P38319 YER076CYER076C 909 nt3.95□□□□□ -1.78
TDP1P38319 YER079WYER079W 633 nt3.95□□□□□ -1.78
TDP1P38319 COX4YGL187C 468 nt3.95□□□□□ -1.78
TDP1P38319 TAM41YGR046W 1158 nt3.95□□□□□ -1.78
TDP1P38319 LSB1YGR136W 726 nt3.95□□□□□ -1.78
TDP1P38319 RTT102YGR275W 474 nt3.95□□□□□ -1.78
TDP1P38319 SWS2YNL081C 432 nt3.95□□□□□ -1.78
TDP1P38319 RPL18BYNL301C 561 nt3.95□□□□□ -1.78
TDP1P38319 YPR170CYPR170C 336 nt3.95□□□□□ -1.78
TDP1P38319 snR41snR41 95 nt3.95□□□□□ -1.78
TDP1P38319 RNA14YMR061W 2034 nt3.95□□□□□ -1.78
TDP1P38319 LYP1YNL268W 1836 nt3.95□□□□□ -1.78
TDP1P38319 GCD2YGR083C 1956 nt3.94□□□□□ -1.78
TDP1P38319 ACK1YDL203C 1872 nt3.94□□□□□ -1.78
TDP1P38319 ERG11YHR007C 1593 nt3.94□□□□□ -1.78
TDP1P38319 RSC3YDR303C 2658 nt3.94□□□□□ -1.78
TDP1P38319 AIM21YIR003W 2040 nt3.94□□□□□ -1.78
TDP1P38319 RPO31YOR116C 4383 nt3.94□□□□□ -1.78
TDP1P38319 YHR125WYHR125W 306 nt3.94□□□□□ -1.78
TDP1P38319 YHR130CYHR130C 336 nt3.94□□□□□ -1.78
TDP1P38319 YHR138CYHR138C 345 nt3.94□□□□□ -1.78
TDP1P38319 CNB1YKL190W 528 nt3.94□□□□□ -1.78
TDP1P38319 YBL010CYBL010C 843 nt3.94□□□□□ -1.78
TDP1P38319 GLO1YML004C 981 nt3.94□□□□□ -1.78
TDP1P38319 YMR158W-BYMR158W-B 321 nt3.94□□□□□ -1.78
TDP1P38319 PHO80YOL001W 882 nt3.94□□□□□ -1.78
TDP1P38319 GRX7YBR014C 612 nt3.94□□□□□ -1.78
TDP1P38319 RPS10AYOR293W 318 nt3.94□□□□□ -1.78
TDP1P38319 YRO2YBR054W 1035 nt3.94□□□□□ -1.78
TDP1P38319 YPL278CYPL278C 303 nt3.94□□□□□ -1.78
TDP1P38319 PIN3YPR154W 648 nt3.94□□□□□ -1.78
TDP1P38319 YBR090CYBR090C 369 nt3.94□□□□□ -1.78
TDP1P38319 GYP6YJL044C 1377 nt3.93□□□□□ -1.78
TDP1P38319 YDL187CYDL187C 330 nt3.93□□□□□ -1.78
TDP1P38319 YER087C-AYER087C-A 552 nt3.93□□□□□ -1.78
TDP1P38319 YGR039WYGR039W 312 nt3.93□□□□□ -1.78
TDP1P38319 YHR050W-AYHR050W-A 171 nt3.93□□□□□ -1.78
TDP1P38319 RPS1AYLR441C 768 nt3.93□□□□□ -1.78
TDP1P38319 YBL055CYBL055C 1257 nt3.93□□□□□ -1.78
TDP1P38319 DYN3YMR299C 939 nt3.93□□□□□ -1.78
TDP1P38319 CIT1YNR001C 1440 nt3.93□□□□□ -1.78
TDP1P38319 MON1YGL124C 1935 nt3.93□□□□□ -1.78
TDP1P38319 AZR1YGR224W 1842 nt3.93□□□□□ -1.78
TDP1P38319 YCT1YLL055W 1596 nt3.93□□□□□ -1.78
TDP1P38319 ESA1YOR244W 1338 nt3.93□□□□□ -1.78
TDP1P38319 ULP1YPL020C 1866 nt3.92□□□□□ -1.78
TDP1P38319 YER119C-AYER119C-A 372 nt3.92□□□□□ -1.78
TDP1P38319 AGE2YIL044C 897 nt3.92□□□□□ -1.78
TDP1P38319 SDP1YIL113W 630 nt3.92□□□□□ -1.78
TDP1P38319 YLR290CYLR290C 834 nt3.92□□□□□ -1.78
TDP1P38319 YNL235CYNL235C 432 nt3.92□□□□□ -1.78
TDP1P38319 YOR082CYOR082C 342 nt3.92□□□□□ -1.78
TDP1P38319 YPL119C-AYPL119C-A 264 nt3.92□□□□□ -1.78
TDP1P38319 snR17asnR17a 333 nt3.92□□□□□ -1.78
TDP1P38319 SVS1YPL163C 783 nt3.92□□□□□ -1.78
TDP1P38319 YPR003CYPR003C 2265 nt3.92□□□□□ -1.78
TDP1P38319 AFR1YDR085C 1863 nt3.92□□□□□ -1.78
TDP1P38319 YMR046CYMR046C 1323 nt3.92□□□□□ -1.78
TDP1P38319 DIT2YDR402C 1470 nt3.92□□□□□ -1.78
TDP1P38319 DPH6YLR143W 2058 nt3.91□□□□□ -1.78
TDP1P38319 ISW2YOR304W 3363 nt3.91□□□□□ -1.78
TDP1P38319 PES4YFR023W 1836 nt3.91□□□□□ -1.78
TDP1P38319 GEM1YAL048C 1989 nt3.91□□□□□ -1.78
TDP1P38319 YDR366CYDR366C 399 nt3.91□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 20 ms