Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SNCAP37840 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNCAP37840 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNCAP37840 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SNCAP37840 FEM1AP1-201ENST00000431297 1995 ntBASIC17.26■□□□□ 0.35
SNCAP37840 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SNCAP37840 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
SNCAP37840 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNCAP37840 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.26■□□□□ 0.35
SNCAP37840 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.26■□□□□ 0.35
SNCAP37840 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.26■□□□□ 0.35
SNCAP37840 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNCAP37840 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNCAP37840 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNCAP37840 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNCAP37840 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.26■□□□□ 0.35
SNCAP37840 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNCAP37840 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNCAP37840 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNCAP37840 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNCAP37840 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNCAP37840 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SNCAP37840 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNCAP37840 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNCAP37840 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNCAP37840 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SNCAP37840 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.25■□□□□ 0.35
SNCAP37840 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.25■□□□□ 0.35
SNCAP37840 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNCAP37840 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNCAP37840 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.25■□□□□ 0.35
SNCAP37840 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNCAP37840 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SNCAP37840 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.25■□□□□ 0.35
SNCAP37840 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.24■□□□□ 0.35
SNCAP37840 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNCAP37840 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.24■□□□□ 0.35
SNCAP37840 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNCAP37840 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNCAP37840 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.24■□□□□ 0.35
SNCAP37840 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNCAP37840 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SNCAP37840 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.24■□□□□ 0.35
SNCAP37840 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.24■□□□□ 0.35
SNCAP37840 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SNCAP37840 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNCAP37840 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNCAP37840 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SNCAP37840 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SNCAP37840 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SNCAP37840 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNCAP37840 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
SNCAP37840 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SNCAP37840 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNCAP37840 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.23■□□□□ 0.35
SNCAP37840 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNCAP37840 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.23■□□□□ 0.35
SNCAP37840 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.23■□□□□ 0.35
SNCAP37840 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNCAP37840 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNCAP37840 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.23■□□□□ 0.35
SNCAP37840 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNCAP37840 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SNCAP37840 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNCAP37840 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNCAP37840 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNCAP37840 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNCAP37840 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNCAP37840 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNCAP37840 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNCAP37840 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SNCAP37840 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNCAP37840 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNCAP37840 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SNCAP37840 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNCAP37840 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNCAP37840 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNCAP37840 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNCAP37840 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
SNCAP37840 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNCAP37840 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.22■□□□□ 0.35
SNCAP37840 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNCAP37840 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SNCAP37840 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNCAP37840 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNCAP37840 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SNCAP37840 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNCAP37840 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SNCAP37840 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNCAP37840 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SNCAP37840 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNCAP37840 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.21■□□□□ 0.35
SNCAP37840 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNCAP37840 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNCAP37840 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.21■□□□□ 0.35
SNCAP37840 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNCAP37840 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SNCAP37840 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SNCAP37840 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.21■□□□□ 0.35
SNCAP37840 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms