Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.27■□□□□ 0.84
CCKBRP32239 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCKBRP32239 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCKBRP32239 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CCKBRP32239 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCKBRP32239 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.27■□□□□ 0.84
CCKBRP32239 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.27■□□□□ 0.84
CCKBRP32239 AL162412.1-201ENST00000567129 965 ntBASIC20.27■□□□□ 0.84
CCKBRP32239 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCKBRP32239 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCKBRP32239 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.27■□□□□ 0.84
CCKBRP32239 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CCKBRP32239 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCKBRP32239 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.27■□□□□ 0.83
CCKBRP32239 KRT16P2-201ENST00000414673 1423 ntBASIC20.27■□□□□ 0.83
CCKBRP32239 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCKBRP32239 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.26■□□□□ 0.83
CCKBRP32239 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCKBRP32239 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCKBRP32239 POU5F1P3-201ENST00000428824 1078 ntBASIC20.26■□□□□ 0.83
CCKBRP32239 AC093787.1-201ENST00000450396 207 ntBASIC20.26■□□□□ 0.83
CCKBRP32239 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.26■□□□□ 0.83
CCKBRP32239 AC016405.3-201ENST00000607710 860 ntBASIC20.26■□□□□ 0.83
CCKBRP32239 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.26■□□□□ 0.83
CCKBRP32239 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CCKBRP32239 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCKBRP32239 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCKBRP32239 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCKBRP32239 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCKBRP32239 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCKBRP32239 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCKBRP32239 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.25■□□□□ 0.83
CCKBRP32239 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCKBRP32239 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCKBRP32239 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.25■□□□□ 0.83
CCKBRP32239 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCKBRP32239 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.25■□□□□ 0.83
CCKBRP32239 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCKBRP32239 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.25■□□□□ 0.83
CCKBRP32239 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.25■□□□□ 0.83
CCKBRP32239 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCKBRP32239 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCKBRP32239 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCKBRP32239 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCKBRP32239 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCKBRP32239 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCKBRP32239 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCKBRP32239 AC087742.1-201ENST00000575880 1738 ntBASIC20.24■□□□□ 0.83
CCKBRP32239 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCKBRP32239 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.24■□□□□ 0.83
CCKBRP32239 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.24■□□□□ 0.83
CCKBRP32239 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.24■□□□□ 0.83
CCKBRP32239 RNA5SP413-201ENST00000516373 109 ntBASIC20.24■□□□□ 0.83
CCKBRP32239 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
CCKBRP32239 ITM2C-210ENST00000620962 501 ntBASIC20.24■□□□□ 0.83
CCKBRP32239 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCKBRP32239 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCKBRP32239 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCKBRP32239 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCKBRP32239 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
CCKBRP32239 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCKBRP32239 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.24■□□□□ 0.83
CCKBRP32239 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCKBRP32239 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCKBRP32239 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCKBRP32239 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCKBRP32239 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCKBRP32239 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.23■□□□□ 0.83
CCKBRP32239 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
CCKBRP32239 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CCKBRP32239 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.23■□□□□ 0.83
CCKBRP32239 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCKBRP32239 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCKBRP32239 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.23■□□□□ 0.83
CCKBRP32239 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCKBRP32239 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.22■□□□□ 0.83
CCKBRP32239 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.22■□□□□ 0.83
CCKBRP32239 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCKBRP32239 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCKBRP32239 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCKBRP32239 RBM17P2-201ENST00000616397 1405 ntBASIC20.22■□□□□ 0.83
CCKBRP32239 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.22■□□□□ 0.83
CCKBRP32239 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.22■□□□□ 0.83
CCKBRP32239 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.22■□□□□ 0.83
CCKBRP32239 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.22■□□□□ 0.83
CCKBRP32239 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCKBRP32239 AC243732.1-201ENST00000612648 864 ntBASIC20.22■□□□□ 0.83
CCKBRP32239 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCKBRP32239 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCKBRP32239 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCKBRP32239 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCKBRP32239 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCKBRP32239 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.21■□□□□ 0.83
CCKBRP32239 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCKBRP32239 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCKBRP32239 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCKBRP32239 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCKBRP32239 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCKBRP32239 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.21■□□□□ 0.83
CCKBRP32239 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms