Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SHC1P29353 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC1P29353 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHC1P29353 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.28■□□□□ 0.68
SHC1P29353 AL034346.1-201ENST00000568244 1277 ntBASIC19.28■□□□□ 0.68
SHC1P29353 TERF1P2-201ENST00000583350 1212 ntBASIC19.28■□□□□ 0.68
SHC1P29353 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SHC1P29353 AP006587.3-201ENST00000525742 1516 ntBASIC19.28■□□□□ 0.68
SHC1P29353 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.28■□□□□ 0.68
SHC1P29353 AC055733.4-201ENST00000638462 1354 ntBASIC19.28■□□□□ 0.68
SHC1P29353 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC1P29353 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.27■□□□□ 0.68
SHC1P29353 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHC1P29353 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHC1P29353 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SHC1P29353 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SHC1P29353 DUX4L2-201ENST00000561772 1275 ntBASIC19.27■□□□□ 0.68
SHC1P29353 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
SHC1P29353 DUX4L6-201ENST00000626483 1275 ntBASIC19.27■□□□□ 0.68
SHC1P29353 DUX4L1-201ENST00000627662 1275 ntBASIC19.27■□□□□ 0.68
SHC1P29353 DUX4L8-201ENST00000629013 1275 ntBASIC19.27■□□□□ 0.68
SHC1P29353 DUX4L3-201ENST00000630187 1275 ntBASIC19.27■□□□□ 0.68
SHC1P29353 DUX4L7-201ENST00000630678 1275 ntBASIC19.27■□□□□ 0.68
SHC1P29353 DUX4L5-201ENST00000630834 1275 ntBASIC19.27■□□□□ 0.68
SHC1P29353 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SHC1P29353 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHC1P29353 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SHC1P29353 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SHC1P29353 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHC1P29353 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHC1P29353 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SHC1P29353 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SHC1P29353 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHC1P29353 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.26■□□□□ 0.67
SHC1P29353 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHC1P29353 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHC1P29353 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHC1P29353 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.26■□□□□ 0.67
SHC1P29353 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.26■□□□□ 0.67
SHC1P29353 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SHC1P29353 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHC1P29353 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
SHC1P29353 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHC1P29353 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SHC1P29353 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SHC1P29353 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
SHC1P29353 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SHC1P29353 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHC1P29353 AC073130.3-201ENST00000624389 2278 ntBASIC19.25■□□□□ 0.67
SHC1P29353 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHC1P29353 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHC1P29353 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHC1P29353 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SHC1P29353 KRT18P14-201ENST00000534205 1250 ntBASIC19.25■□□□□ 0.67
SHC1P29353 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SHC1P29353 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHC1P29353 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHC1P29353 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHC1P29353 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.24■□□□□ 0.67
SHC1P29353 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC1P29353 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SHC1P29353 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.24■□□□□ 0.67
SHC1P29353 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SHC1P29353 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.24■□□□□ 0.67
SHC1P29353 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHC1P29353 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHC1P29353 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.24■□□□□ 0.67
SHC1P29353 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SHC1P29353 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC1P29353 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHC1P29353 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.24■□□□□ 0.67
SHC1P29353 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SHC1P29353 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.24■□□□□ 0.67
SHC1P29353 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SHC1P29353 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.24■□□□□ 0.67
SHC1P29353 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SHC1P29353 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC1P29353 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC1P29353 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.24■□□□□ 0.67
SHC1P29353 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHC1P29353 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHC1P29353 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.24■□□□□ 0.67
SHC1P29353 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC1P29353 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC1P29353 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.24■□□□□ 0.67
SHC1P29353 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC1P29353 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.24■□□□□ 0.67
SHC1P29353 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.24■□□□□ 0.67
SHC1P29353 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC1P29353 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.23■□□□□ 0.67
SHC1P29353 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.23■□□□□ 0.67
SHC1P29353 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHC1P29353 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.23■□□□□ 0.67
SHC1P29353 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.23■□□□□ 0.67
SHC1P29353 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC1P29353 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC1P29353 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHC1P29353 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SHC1P29353 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SHC1P29353 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms